DRSC/TRiP Functional Genomics Resources

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Protein Alignment cuff and M01G12.9

DIOPT Version :9

Sequence 1:NP_610709.1 Gene:cuff / 36269 FlyBaseID:FBgn0260932 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_493059.2 Gene:M01G12.9 / 187385 WormBaseID:WBGene00010822 Length:469 Species:Caenorhabditis elegans


Alignment Length:84 Identity:21/84 - (25%)
Similarity:39/84 - (46%) Gaps:22/84 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 PSIKFPISLRYKDSPPKLEKKPNIFLDNMLQYIESSSYM------YVMVRN------NQQAQLNA 109
            ||:..|:    ||:... ||:    :::||.||:...:.      :||.||      :.....|.
 Worm    45 PSMNNPV----KDTQGG-EKQ----MESMLAYIKQKGWAGESKPNFVMNRNVIGAIPSSTGVENF 100

  Fly   110 NIVCTSEVLELMMCAPYEK 128
            .:..|::| ::::..|.||
 Worm   101 IVFKTNDV-QVIVKTPKEK 118

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cuffNP_610709.1 RAI1 <257..284 CDD:285815
M01G12.9NP_493059.2 CTD 294..355 CDD:289577
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12395
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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