DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cuff and Dxo

DIOPT Version :9

Sequence 1:NP_610709.1 Gene:cuff / 36269 FlyBaseID:FBgn0260932 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_001157242.1 Gene:Dxo / 112403 MGIID:1890444 Length:397 Species:Mus musculus


Alignment Length:378 Identity:88/378 - (23%)
Similarity:151/378 - (39%) Gaps:47/378 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 FPTITKPVSNGWFAWSPIGQFEPNSQKVPYVVVPPSIKFP---ISLR--YKDSPPKLEKKPNIFL 82
            ||...:|...|.|:.....|:..:::.:.| ..||.|..|   ..||  |.|.....:::....|
Mouse    40 FPFYRRPSELGCFSLDAQRQYHGDARALRY-YSPPPINGPGPDFDLRDGYPDRYQPRDEEVQERL 103

  Fly    83 DNMLQYIESSSYMYVMVRNNQ----QAQLNANIVCTSEVLELMMCAPYEKKTGWSLGVTRYRNTM 143
            |::|:        :|:...||    ...|....|.....|..::..|||::.||.|..:|::.|:
Mouse   104 DHLLR--------WVLEHRNQLEGGPGWLAGATVTWRGHLTKLLTTPYERQEGWQLAASRFQGTL 160

  Fly   144 YICRIDVEQPDPIDQDNLKRAMQEFWLRNLRTHCVFENGIKMHQH----------NQSSE--EHL 196
            |:.  :||.|    ....:|..:...||.|     ...|.|..|:          :.|.|  .::
Mouse   161 YLS--EVETP----AARAQRLARPPLLREL-----MYMGYKFEQYMCADKPGGSPDPSGEVNTNV 214

  Fly   197 RFHGVFSFDLNGNRVLFDSPVLAEMPSTTLNGSALSWVDLQIRPMFMSRLDWPEHNRTEALKWWV 261
            .:..|....|..:.:||...|....|..........:|:|:......|...|....|.:.||||.
Mouse   215 AYCSVLRSRLGNHPLLFSGEVDCLNPQAPCTQPPSCYVELKTSKEMHSPGQWRSFYRHKLLKWWA 279

  Fly   262 KCFLLGIESLYIARRDENAHVHNIEKTLVRDLWKSCEKD---WSPTVCANFMIYLLNCISQVMAP 323
            :.||.|:..:....|:....|.:::.....:::::...|   |:|:||.||....|: .:|....
Mouse   280 QSFLPGVPHVVAGFRNPEGFVCSLKTFPTMEMFENVRNDREGWNPSVCMNFCAAFLS-FAQSTVV 343

  Fly   324 IDCPSTVYLFQFDASQGTVSYKGLRGRNQYTFVSDWFRMMLDDHTNDMCKTPN 376
            .|.|..|:||.::.. |.|:....|.. .|.|:..|:...:......:.|||:
Mouse   344 QDDPRLVHLFSWEPG-GPVTVSVHRDA-PYAFLPSWYVETMTQDLPPLSKTPS 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cuffNP_610709.1 RAI1 <257..284 CDD:285815 9/26 (35%)
DxoNP_001157242.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..30
Substrate binding. /evidence=ECO:0000269|PubMed:23523372, ECO:0000269|PubMed:28283058 131..133 0/1 (0%)
RAI1 235..302 CDD:285815 16/66 (24%)
Adenosine 3',5'-bisphosphate, inhibitor. /evidence=ECO:0000269|PubMed:30180947 253..256 1/2 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1982
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12395
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.870

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