DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13185 and NSR1

DIOPT Version :9

Sequence 1:NP_001097279.2 Gene:CG13185 / 36268 FlyBaseID:FBgn0033661 Length:5526 Species:Drosophila melanogaster
Sequence 2:NP_011675.1 Gene:NSR1 / 853064 SGDID:S000003391 Length:414 Species:Saccharomyces cerevisiae


Alignment Length:405 Identity:81/405 - (20%)
Similarity:151/405 - (37%) Gaps:92/405 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly  4836 NPFDIDAMKENMQPAEEPEADGDDEHDANEEGDPQSDGSDSEEDEAGTEAKPAEEDHGEGEEATP 4900
            |..::.|.|:..:...:..:....|..::.....:|:.....|.|:.:.:..::   .|...::.
Yeast    10 NKKEVKASKQAKEEKAKAVSSSSSESSSSSSSSSESESESESESESSSSSSSSD---SESSSSSS 71

  Fly  4901 EDEKDEAETQKRGELEDEDDSKPEDSPEDSKEEKEEKREEKPEEHSQSKDKASKEENVQSMPETD 4965
            .|.:.||||:|    |:..||....|...|.||:||::||..:|.|:....:....:..|..|::
Yeast    72 SDSESEAETKK----EESKDSSSSSSDSSSDEEEEEEKEETKKEESKESSSSDSSSSSSSDSESE 132

  Fly  4966 QSSSADQVQQPQDPDIKQDQK-LDEQETGEEKDG-----VGQAENDADD----------GGHQGV 5014
            :..|.|:.::.:|.:.::|:: .::::..||.:.     ||:.....||          ||..|.
Yeast   133 KEESNDKKRKSEDAEEEEDEESSNKKQKNEETEEPATIFVGRLSWSIDDEWLKKEFEHIGGVIGA 197

  Fly  5015 AETQETVSQEDRKNERQTQEKRKQGRTNEERSLGEAEQNKLKQLKTIDQLKDSKESDDAEQEKPE 5079
            ....          ||.|...|..|..:.|        ||....|.|.::: .||.|.       
Yeast   198 RVIY----------ERGTDRSRGYGYVDFE--------NKSYAEKAIQEMQ-GKEIDG------- 236

  Fly  5080 PMDQTEAEEYQHVKEPKNSDKTTLDNA-TEEQSKKIQHQEDEPPNEEEIEAENVDELMEAEEPAV 5143
                          .|.|.|.:|...| ..:::||......||  .:.:...|:         :.
Yeast   237 --------------RPINCDMSTSKPAGNNDRAKKFGDTPSEP--SDTLFLGNL---------SF 276

  Fly  5144 DPEDDAELEQLGAE--------KTEQKSDKP--------SKTEKSKEQLETPEGMEIEGEVV-LT 5191
            :.:.||..|.....        .|..::::|        |..|.:|:.|:..:|..|:...| |.
Yeast   277 NADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYIDNRPVRLD 341

  Fly  5192 MTVPRSSETTAHSNS 5206
            .:.||.:.......|
Yeast   342 FSSPRPNNDGGRGGS 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13185NP_001097279.2 MDN1 298..5521 CDD:227596 81/405 (20%)
P-loop_NTPase 315..505 CDD:304359
P-loop_NTPase <887..972 CDD:304359
P-loop_NTPase 1147..1283 CDD:304359
P-loop_NTPase 1454..1603 CDD:304359
P-loop_NTPase 1795..1946 CDD:304359
P-loop_NTPase <2335..>2378 CDD:304359
Prothymosin 4843..4920 CDD:281265 13/76 (17%)
PHA03151 4856..5060 CDD:177546 47/219 (21%)
MttA_Hcf106 <5046..5166 CDD:294511 21/128 (16%)
vWA_midasin 5261..5526 CDD:238737
NSR1NP_011675.1 RRM1_gar2 169..244 CDD:409881 23/114 (20%)
RRM2_gar2 269..341 CDD:409882 13/80 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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