DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13185 and Puf60

DIOPT Version :9

Sequence 1:NP_001097279.2 Gene:CG13185 / 36268 FlyBaseID:FBgn0033661 Length:5526 Species:Drosophila melanogaster
Sequence 2:XP_006241956.2 Gene:Puf60 / 84401 RGDID:621674 Length:564 Species:Rattus norvegicus


Alignment Length:188 Identity:37/188 - (19%)
Similarity:75/188 - (39%) Gaps:38/188 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly  1187 YIGTYAADLDGKLTFRE-----GVLVQ--------AMRH-GFWIILDELNLASTDILEALNRVLD 1237
            |:|:...:| |:.|.|:     |.:..        .|:| ||..:..|:..|:...||.:|.|:.
  Rat   137 YVGSIYYEL-GEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVML 200

  Fly  1238 DNRELYIAETQTLVKAHPNFMLFATQNPPGLYGGRKTLSRAFKNRFIELHFADIPREELETILE- 1301
            ..|.:.:.....:.:|.|.....|.:            :|||...::.....|:..::::::.| 
  Rat   201 GGRNIKVGRPSNIGQAQPIIDQLAEE------------ARAFNRIYVASVHQDLSDDDIKSVFEA 253

  Fly  1302 ----KRCFI---PPTYARKMVQCMTQLQQHRKNTSKQVFTLRDLFRWGNRYTHADKSL 1352
                |.|.:   |.|...|....   ::..:..:|:...:..:||..|.:|....|::
  Rat   254 FGKIKSCTLARDPTTGKHKGYGF---IEYEKAQSSQDAVSSMNLFDLGGQYLRVGKAV 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13185NP_001097279.2 MDN1 298..5521 CDD:227596 37/188 (20%)
P-loop_NTPase 315..505 CDD:304359
P-loop_NTPase <887..972 CDD:304359
P-loop_NTPase 1147..1283 CDD:304359 24/109 (22%)
P-loop_NTPase 1454..1603 CDD:304359
P-loop_NTPase 1795..1946 CDD:304359
P-loop_NTPase <2335..>2378 CDD:304359
Prothymosin 4843..4920 CDD:281265
PHA03151 4856..5060 CDD:177546
MttA_Hcf106 <5046..5166 CDD:294511
vWA_midasin 5261..5526 CDD:238737
Puf60XP_006241956.2 half-pint 7..564 CDD:130706 37/188 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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