DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13185 and TWD1

DIOPT Version :9

Sequence 1:NP_001097279.2 Gene:CG13185 / 36268 FlyBaseID:FBgn0033661 Length:5526 Species:Drosophila melanogaster
Sequence 2:NP_188801.2 Gene:TWD1 / 821718 AraportID:AT3G21640 Length:365 Species:Arabidopsis thaliana


Alignment Length:396 Identity:80/396 - (20%)
Similarity:133/396 - (33%) Gaps:153/396 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly  3537 DDALSICNQTWQQEEHRRCQLKAEAESLYVTKTKGGVDSEELIEMQEIEHNFPTNLDEDFAEFVS 3601
            |::|....||..|            ||..||:....|.||     ...|.|.|..:|.: ||.:.
plant     2 DESLEHQTQTHDQ------------ESEIVTEGSAVVHSE-----PSQEGNVPPKVDSE-AEVLD 48

  Fly  3602 QPTLEQVLKLDKKASAKDKQSQIVVEEDYAFLARNFIDVMTRH--TQVYYKEQPKSSKELELHLL 3664
            :...:|::| :...|...|.|...:.  |....:|     ::|  ...::::||     :||   
plant    49 EKVSKQIIK-EGHGSKPSKYSTCFLH--YRAWTKN-----SQHKFEDTWHEQQP-----IEL--- 97

  Fly  3665 APYQARFQVFANLHGHYKTALGSSLEERACNGLAFGLALQQKQLRDI-----EL---EEGVSSSP 3721
                               .||...:|.|  |||.|:|..:...|.:     ||   :||..|.|
plant    98 -------------------VLGKEKKELA--GLAIGVASMKSGERALVHVGWELAYGKEGNFSFP 141

  Fly  3722 ---------YDF----YKDSNISEIQSCLDVMERI---------------EKRVLEQLEQYPE-- 3756
                     |:.    :.::...:.:|.:.|.|||               |:::.|.::||..  
plant   142 NVPPMADLLYEVEVIGFDETKEGKARSDMTVEERIGAADRRKMDGNSLFKEEKLEEAMQQYEMAI 206

  Fly  3757 -----------HAGLADIKLVISRIRRLPAHAPVVRFNTGFQLLRQKLALWNE-VAHRNNNLVSE 3809
                       :....|:.|.:..    |.|     .|....|:  ||..::| :.|.|..|..|
plant   207 AYMGDDFMFQLYGKYQDMALAVKN----PCH-----LNIAACLI--KLKRYDEAIGHCNIVLTEE 260

  Fly  3810 EIEVAEFVQRWTRLELQHWRNCLGQTAAQVELQAYRYWFFIYNLLQQFIHQKQLDHSYTDIKLAE 3874
            |.......:|             |:..|::                     .|:|.:..|.:.| 
plant   261 EKNPKALFRR-------------GKAKAEL---------------------GQMDSARDDFRKA- 290

  Fly  3875 QRFAQD 3880
            |::|.|
plant   291 QKYAPD 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13185NP_001097279.2 MDN1 298..5521 CDD:227596 80/396 (20%)
P-loop_NTPase 315..505 CDD:304359
P-loop_NTPase <887..972 CDD:304359
P-loop_NTPase 1147..1283 CDD:304359
P-loop_NTPase 1454..1603 CDD:304359
P-loop_NTPase 1795..1946 CDD:304359
P-loop_NTPase <2335..>2378 CDD:304359
Prothymosin 4843..4920 CDD:281265
PHA03151 4856..5060 CDD:177546
MttA_Hcf106 <5046..5166 CDD:294511
vWA_midasin 5261..5526 CDD:238737
TWD1NP_188801.2 FKBP_C 62..156 CDD:395196 27/129 (21%)
PRK15331 196..310 CDD:357168 27/147 (18%)
TPR repeat 230..259 CDD:276809 10/39 (26%)
TPR repeat 264..292 CDD:276809 7/62 (11%)
TPR repeat 298..323 CDD:276809
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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