DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13185 and puf60a

DIOPT Version :9

Sequence 1:NP_001097279.2 Gene:CG13185 / 36268 FlyBaseID:FBgn0033661 Length:5526 Species:Drosophila melanogaster
Sequence 2:XP_005163557.1 Gene:puf60a / 562370 ZFINID:ZDB-GENE-030131-2891 Length:552 Species:Danio rerio


Alignment Length:267 Identity:51/267 - (19%)
Similarity:99/267 - (37%) Gaps:58/267 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly  1119 QPCTHYILTESVKKNLKDLARIISIGKLPIL-LQGPTSAGKTSL----------IDYVARRSGNR 1172
            |....|.:.:|:|..|  :.:.|:..:..:. ||.|.|....||          :..||.:. .|
Zfish    40 QKAKKYAMEQSIKSVL--VKQTIAHQQQQLTNLQMPNSLQMASLTMGFGDPLSPLQSVAAQR-QR 101

  Fly  1173 CLRINNHEHTDLQEYIGTYAADLDGKLTFREGVL--------------VQAMRHGFWIILDELNL 1223
            .|.|.      .:.|:|:...:| |:.|.|:...              |.....||..:..|:..
Zfish   102 ALAIM------CRVYVGSIYYEL-GEDTIRQAFAPFGPIKSIDMSWDSVTLKHKGFAFVEYEVPE 159

  Fly  1224 ASTDILEALNRVLDDNRELYIAETQTLVKAHPNFMLFATQNPPGLYGGRKTLSRAFKNRFIELHF 1288
            |:...||.:|.|:...|.:.:.....:.:|.|.....|.:            :|||...::....
Zfish   160 AAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEE------------ARAFNRIYVASVH 212

  Fly  1289 ADIPREELETILE-----KRCFI---PPTYARKMVQCMTQLQQHRKNTSKQVFTLRDLFRWGNRY 1345
            .|:..::::::.|     |.|.:   |.|...|....   ::..:..:::...:..:||..|.:|
Zfish   213 PDLSDDDIKSVFEAFGRIKSCSLARDPTTGKHKGYGF---IEYDKAQSAQDAVSSMNLFDLGGQY 274

  Fly  1346 THADKSL 1352
            ....|::
Zfish   275 LRVGKAV 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13185NP_001097279.2 MDN1 298..5521 CDD:227596 51/267 (19%)
P-loop_NTPase 315..505 CDD:304359
P-loop_NTPase <887..972 CDD:304359
P-loop_NTPase 1147..1283 CDD:304359 33/160 (21%)
P-loop_NTPase 1454..1603 CDD:304359
P-loop_NTPase 1795..1946 CDD:304359
P-loop_NTPase <2335..>2378 CDD:304359
Prothymosin 4843..4920 CDD:281265
PHA03151 4856..5060 CDD:177546
MttA_Hcf106 <5046..5166 CDD:294511
vWA_midasin 5261..5526 CDD:238737
puf60aXP_005163557.1 half-pint 16..552 CDD:130706 51/267 (19%)
P-loop_NTPase <34..>131 CDD:304359 23/100 (23%)
RRM1_PUF60 107..182 CDD:240816 16/75 (21%)
RRM2_PUF60 204..280 CDD:240817 11/78 (14%)
RRM3_UHM_PUF60 454..551 CDD:241092
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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