DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13185 and GABRQ

DIOPT Version :9

Sequence 1:NP_001097279.2 Gene:CG13185 / 36268 FlyBaseID:FBgn0033661 Length:5526 Species:Drosophila melanogaster
Sequence 2:NP_061028.3 Gene:GABRQ / 55879 HGNCID:14454 Length:632 Species:Homo sapiens


Alignment Length:640 Identity:110/640 - (17%)
Similarity:218/640 - (34%) Gaps:200/640 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly  2306 VRALQQLAEIKSQLLLLQTYIKTADSLNTGGSFEWVDS----QIVTSL----KCGQYILLEHVNL 2362
            :|.:.:.|.|   |||::|::...:..:....|.:..|    ::|.:|    .|....:::.:  
Human     3 IRGMLRAAVI---LLLIRTWLAEGNYPSPIPKFHFEFSSAVPEVVLNLFNCKNCANEAVVQKI-- 62

  Fly  2363 CSSAVLDRLNPVFEPN--GSLL-------------IAEKGI----------SAQDSAEVVYKSTN 2402
             ...||.|.:....||  |:.:             |:|..:          :.:||....|::| 
Human    63 -LDRVLSRYDVRLRPNFGGAPVPVRISIYVTSIEQISEMNMDYTITMFFHQTWKDSRLAYYETT- 125

  Fly  2403 FRAFLTVDPKNGELSRAMRNRCVELSLSRDTYSVDDLRAFVHE-----------------QGVRE 2450
                         |:..:..|..|.....|.|.::...||||:                 .|:|.
Human   126 -------------LNLTLDYRMHEKLWVPDCYFLNSKDAFVHDVTVENRVFQLHPDGTVRYGIRL 177

  Fly  2451 MEAIDCILRVHK------GLSQLTEFNNYSIS-------------------HLTQFAFL------ 2484
            .....|.|.:||      ..:.:.|...|::.                   |:.||.||      
Human   178 TTTAACSLDLHKFPMDKQACNLVVESYGYTVEDIILFWDDNGNAIHMTEELHIPQFTFLGRTITS 242

  Fly  2485 ------SAAYRR--IGYELKRAIYVAAMEVY---VYSANTDLMGYGLSYYQNKLREVVLAQTEVF 2538
                  :.:|.|  :.::::|.:....::||   |.:..|..:.:.::|..:..| |.:..|.:.
Human   243 KEVYFYTGSYIRLILKFQVQREVNSYLVQVYWPTVLTTITSWISFWMNYDSSAAR-VTIGLTSML 306

  Fly  2539 EEVAVIQEDFLSDVILNSGNLNSLTLIKRQAVALKVLLDGYTEGKIPQKLLASLFHEMEKLKLDQ 2603
              :....:..|.|      .|.:::.||...:.:.|.|.......:....:..||:.....:..:
Human   307 --ILTTIDSHLRD------KLPNISCIKAIDIYILVCLFFVFLSLLEYVYINYLFYSRGPRRQPR 363

  Fly  2604 RN--PQKLIRHFLYMLYESSAIGDLELRHLYLQPWLSKDTAFQELSQNLYNCLQKRSNTDTGTLA 2666
            |:  |:::|..:   .|:...:|:::                           ....|.:.| ::
Human   364 RHRRPRRVIARY---RYQQVVVGNVQ---------------------------DGLINVEDG-VS 397

  Fly  2667 NLPWNRKLIPRLRDYSTAESNSELNPLNLSALLLARLVVDIIPVSSVTTVQQMNALQYSQALCKK 2731
            :||    :.|.....::.||...|...:..|.|...     ..:|.:|::.....|...::|...
Human   398 SLP----ITPAQAPLASPESLGSLTSTSEQAQLATS-----ESLSPLTSLSGQAPLATGESLSDL 453

  Fly  2732 QVTEKYANHLL-ANFSSFL---EVLHTSLLEDLETADLDLPQYAHLVTRFHWFNRILATAQQKLL 2792
            ..|.:.|.|.. ..|:.|.   .::.|.:...:|.       :.|.||..|       ....:.|
Human   454 PSTSEQARHSYGVRFNGFQADDSIIPTEIRNRVEA-------HGHGVTHDH-------EDSNESL 504

  Fly  2793 YNNELH------VPLMH---KLVLHFQWLEKHLLVPLIELTAKSGCARMLTIQDR 2838
            .::|.|      .|::|   |.|....|       .|.:...||.|   |.|:::
Human   505 SSDERHGHGPSGKPMLHHGEKGVQEAGW-------DLDDNNDKSDC---LAIKEQ 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13185NP_001097279.2 MDN1 298..5521 CDD:227596 110/640 (17%)
P-loop_NTPase 315..505 CDD:304359
P-loop_NTPase <887..972 CDD:304359
P-loop_NTPase 1147..1283 CDD:304359
P-loop_NTPase 1454..1603 CDD:304359
P-loop_NTPase 1795..1946 CDD:304359
P-loop_NTPase <2335..>2378 CDD:304359 8/50 (16%)
Prothymosin 4843..4920 CDD:281265
PHA03151 4856..5060 CDD:177546
MttA_Hcf106 <5046..5166 CDD:294511
vWA_midasin 5261..5526 CDD:238737
GABRQNP_061028.3 Neur_chan_LBD 60..>353 CDD:332142 52/318 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 410..458 10/52 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 491..523 9/38 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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