DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13185 and Dek

DIOPT Version :9

Sequence 1:NP_001097279.2 Gene:CG13185 / 36268 FlyBaseID:FBgn0033661 Length:5526 Species:Drosophila melanogaster
Sequence 2:NP_652058.1 Gene:Dek / 47906 FlyBaseID:FBgn0026533 Length:669 Species:Drosophila melanogaster


Alignment Length:748 Identity:170/748 - (22%)
Similarity:274/748 - (36%) Gaps:233/748 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly  4595 DLMQDEEGQSKQESKNGEGFGLEDGTGENDASDKIESEDQLDDAKRPE--DRKDEGD-----KQE 4652
            |.:.|.|..|..... .:..|.:...|..||::...:.|....|...:  |:|.:||     ..|
  Fly    23 DKVSDVENASVTAGV-AKAVGAQPERGSKDAAESPAAVDASASAATDDVADKKAKGDSTAVSNTE 86

  Fly  4653 PDC----KEEKG----IEMSDDFDAKMQDVEKPEEDDSGESEEEEDLNKEMGETEEGAEKLDDQI 4709
            .|.    |:||.    |:.|::.|||.:|..:.:|::|.:.:|.||      |.:|.|       
  Fly    87 SDAAAADKKEKSPSPVIKKSNNKDAKKEDNSEKDEENSEDGDEPED------EADEKA------- 138

  Fly  4710 WGDDEEEKPEEEQEPDMNEEDQGKGSKDEKDAHNDLDTKNDAAKEDGKDEHEKDGLDATNEPSGE 4774
             .|:|.||    ::|.::.||:.|.:.||                    ...|.|.|...:|..:
  Fly   139 -SDEESEK----KKPKLDAEDKIKDATDE--------------------SKPKSGADKPKKPEPK 178

  Fly  4775 DKRKEQAKDIDDMKDPEMDEEQTNAMHNELEEPPEPEEMDLGDMNNVDEGHDDQDE-QPTDENPF 4838
            .|..:.||:.||      |||         :|..|..|.|.||.|   :|.|..:| ...|||..
  Fly   179 AKNGKVAKEEDD------DEE---------DEDDEDAEDDDGDEN---DGLDKNNEVAEDDENVV 225

  Fly  4839 ---DIDAMKENMQPAEEPEADGDDEHDANEEGDPQSDGSDSEEDE-----AGTE-AKPAEEDHGE 4894
               :||.:.||:   .:...||.....|...|   :.|.::...:     ||.| ||.:.|.:.:
  Fly   226 ALAEIDRINENI---NKTRVDGLQTLHAICFG---AQGKNNVVKKNLRSFAGFEFAKDSAEYNKK 284

  Fly  4895 GEEATPEDEK-------------------------------DEAETQKRGELEDEDDSKPEDSPE 4928
            .|.....|.|                               ||:...::|:.|:|:|::.||..|
  Fly   285 LEAIKKVDNKGLRSICEILTLDRKGSKNETVLRVLKFLMEPDESLCLEQGDEEEEEDAEDEDLDE 349

  Fly  4929 DSKEEKEEKREEKPEEHSQSKDKASK--EENVQSMPE-----------TDQSSSADQVQQPQDPD 4980
            |  ||.....|:|..:..:|...|.:  ..|....|.           .|.|||.|..|:...|.
  Fly   350 D--EEDPPSEEDKKRKSGKSSGGAGRGSARNSTGRPRRATAGKKMSAYVDFSSSDDSEQKVAVPK 412

  Fly  4981 IKQDQKLDEQETGEEKDGVGQAENDADDGGHQGVA-----------------ETQETVSQEDRKN 5028
            .:::   |:.|:|.:.:....:::|...||..|.|                 ..:.:.|:|:.::
  Fly   413 RRRN---DDSESGSDYNPSANSDSDGGRGGGAGAAGRKVPSRGGRGRPARKSRRRNSDSEEEEES 474

  Fly  5029 ERQTQE----KRKQGRTNEE-------------RSLGEAEQNKLKQLKTIDQLKDSKESDDAEQE 5076
            |....:    |||:|...:.             |..|.|.:.:    |..|. :|.:.|:|.|:|
  Fly   475 EVSDADSDVPKRKRGSVGKRGRPAAPASAGRRGRGRGAASRKR----KDSDS-EDEEVSEDEEEE 534

  Fly  5077 KPEPM--DQTEAEEYQHVKEPKNSDKTTLDNATEEQSKKIQHQEDEPPNEEEIEAENVDELMEAE 5139
            .....  ||:|.|..:..|:|....|.:..|...:.:.|...:..:...|...|.::||      
  Fly   535 DVSDFASDQSEEERPKKSKKPITPAKNSKANNKSKPAGKADSRSKKSKKESSEEDDDVD------ 593

  Fly  5140 EPAVDPEDDAELEQLGAEKTEQKSDKPSKTEKSKEQLETPEGMEIEGEVVLTMTVPRSSETTAHS 5204
                             :|.|...|:| .|:|.|:...|.|  :|.|.|                
  Fly   594 -----------------DKDESDEDEP-LTKKGKQAFPTDE--QIRGYV---------------- 622

  Fly  5205 NSEILLDKSSHAEDLSSAEQIEL----RQQYQK 5233
             .|||        |.::.|:|.:    :|.|.|
  Fly   623 -KEIL--------DKANLEEITMKTVCKQVYAK 646

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13185NP_001097279.2 MDN1 298..5521 CDD:227596 170/748 (23%)
P-loop_NTPase 315..505 CDD:304359
P-loop_NTPase <887..972 CDD:304359
P-loop_NTPase 1147..1283 CDD:304359
P-loop_NTPase 1454..1603 CDD:304359
P-loop_NTPase 1795..1946 CDD:304359
P-loop_NTPase <2335..>2378 CDD:304359
Prothymosin 4843..4920 CDD:281265 21/113 (19%)
PHA03151 4856..5060 CDD:177546 57/287 (20%)
MttA_Hcf106 <5046..5166 CDD:294511 25/121 (21%)
vWA_midasin 5261..5526 CDD:238737
DekNP_652058.1 RR_TM4-6 <70..>150 CDD:283990 28/97 (29%)
SAP 288..322 CDD:128789 2/33 (6%)
DEK_C 615..667 CDD:285919 13/59 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.