DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13185 and Fkbp39

DIOPT Version :9

Sequence 1:NP_001097279.2 Gene:CG13185 / 36268 FlyBaseID:FBgn0033661 Length:5526 Species:Drosophila melanogaster
Sequence 2:NP_524364.2 Gene:Fkbp39 / 41860 FlyBaseID:FBgn0013269 Length:357 Species:Drosophila melanogaster


Alignment Length:272 Identity:64/272 - (23%)
Similarity:105/272 - (38%) Gaps:79/272 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  4815 LGDMNNVDEGHDDQDEQPTDENPFDIDAMKENMQPAEEPEADGDDEHDANEEGDPQSDGSDSEED 4879
            ||.::::|...|:.|:|.|.||..:..|:|.:.:        .:|:.|.||.|  :.|..|:::|
  Fly    84 LGYLHDIDSEDDEDDDQMTIENLLNSKAIKNSKK--------SEDDEDENESG--EEDEEDTDDD 138

  Fly  4880 EAGTEAKPAEEDHGEGEEATPEDEKDEAETQKRGELEDEDDSKPEDSPED--------------- 4929
            ....|...:..::||.|:   :|:.|| :.::.|| |||.||...::.|:               
  Fly   139 SQIIEEYESFLENGEEED---DDDVDE-DNEESGE-EDEQDSDDSEAEEEQPKAKVAKLSPGASA 198

  Fly  4930 SKEEKEEKREEKPEEHSQSKDKASKEENVQSMPETDQSSSADQVQQPQDPD---IKQDQKLDEQE 4991
            .|..||:....|.||..|.:.|..|.|..:..|:..:.:.    |||...|   |....|:.:|.
  Fly   199 KKSGKEQNGVAKKEEAKQQQKKKEKPEAKKEQPKAKEPAK----QQPASKDPRTITGGVKIVDQV 259

  Fly  4992 TGEEKDGVGQAENDADDGGHQGVAETQETVSQEDRKNERQTQEKRKQGRTNEERSLGEAEQNKLK 5056
            .|:                                      .|:.|||:......:|..:.|.  
  Fly   260 VGK--------------------------------------GEEAKQGKRVSVYYIGRLQSNN-- 284

  Fly  5057 QLKTIDQLKDSK 5068
              ||.|.|...|
  Fly   285 --KTFDSLLKGK 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13185NP_001097279.2 MDN1 298..5521 CDD:227596 64/272 (24%)
P-loop_NTPase 315..505 CDD:304359
P-loop_NTPase <887..972 CDD:304359
P-loop_NTPase 1147..1283 CDD:304359
P-loop_NTPase 1454..1603 CDD:304359
P-loop_NTPase 1795..1946 CDD:304359
P-loop_NTPase <2335..>2378 CDD:304359
Prothymosin 4843..4920 CDD:281265 21/76 (28%)
PHA03151 4856..5060 CDD:177546 48/221 (22%)
MttA_Hcf106 <5046..5166 CDD:294511 7/23 (30%)
vWA_midasin 5261..5526 CDD:238737
Fkbp39NP_524364.2 FKBP_C 262..354 CDD:278674 11/75 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.