DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13185 and psip1b

DIOPT Version :9

Sequence 1:NP_001097279.2 Gene:CG13185 / 36268 FlyBaseID:FBgn0033661 Length:5526 Species:Drosophila melanogaster
Sequence 2:XP_021325735.1 Gene:psip1b / 407619 ZFINID:ZDB-GENE-030131-3273 Length:1564 Species:Danio rerio


Alignment Length:1579 Identity:318/1579 - (20%)
Similarity:586/1579 - (37%) Gaps:422/1579 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  4040 DKGKGLRNYNK---IKYLHTERQQFVASEKLLEKFAIQEEFLSDNTLLQRLDKHFRTARHVV--K 4099
            |.|.|||...|   :|.|...|.::...:|  :|...|.|          :.|..::|:..|  .
Zfish    93 DPGVGLRGQKKAALVKRLSESRLKWKNKKK--KKAENQTE----------VKKPPKSAKDPVSNS 145

  Fly  4100 ETLGQVPY-----GELITELDDLLASQLERCEHLRSLNVDRSKERPQQKQEAKQILQQKR----K 4155
            ::....|:     .|.:|..||      :..|...:.:.|.|.:....|:...:::..::    |
Zfish   146 DSKAATPHKRETKSESVTLKDD------KNTETRPTRSRDSSAKTSTDKRRTDKVVPARKMTSVK 204

  Fly  4156 ALTDLFKMLHRLGANYKTGLLELSLRNEFEDFQLPPYSIRSMLPRLHPTAQQLDEHLDLYYMKSV 4220
            .:|              ||...|            |.|:  :|.|....|:.|..|     .|.|
Zfish   205 TIT--------------TGWRRL------------PSSV--ILARRMDAAKTLSAH-----RKHV 236

  Fly  4221 FKLKLLQNI--MLTPLSELGPPNIERIKGFAVDLFLLVQQQREHLSGSTKELHELRNSLDS-LRK 4282
            ...|::...  .:..::...|..|.|.....:       :..:.::.....|...|...|| ::.
Zfish   237 LNRKIISTAKKRIDAVNHRKPSRITRSTADPI-------EATDDVTAKPLALKRKRKQNDSEVKG 294

  Fly  4283 LAEI-IPQADINPS-----------TLNFVKSADIAMEIKQHLRQI-------HYVLKQWKLLLS 4328
            .|.| ||..||:.|           |....||.|...|:|::..|.       ..:.||      
Zfish   295 DAPISIPATDISASSTPTGSKRRRLTEPEKKSKDDEKELKENEAQSKEKNEVEQKIEKQ------ 353

  Fly  4329 CAPSSFIEES---ENRLLVRKISLAQSELHSLCIQILNSSQELL--NELNNANLEYLSSEKCVTY 4388
                :.:|:|   :|:::.:|                |.:::::  ||..|...:...||     
Zfish   354 ----NEVEKSNADKNKMMEKK----------------NQAEKIVAENETENKGAKKKESE----- 393

  Fly  4389 QKSYAEIQENIKKTLELLRT----GQNDYLPLAQPIVELLDSVQLKNHTE-IAPEAIDLANADTE 4448
             ||.||.:::.||..:.:.|    .:|......:|         .||.:| ...|.|:...:::|
Zfish   394 -KSDAEKEKSEKKETKKIETERKEARNSEAESKEP---------CKNDSEKKEAERIETRKSESE 448

  Fly  4449 LANIAHSVLMS----------------MQKIYKHHVKTDEV----NQNGEAKEQDEESKEALQ-E 4492
                   ||::                |::..|:..|..|.    ::..|.::.:.|.|||.: |
Zfish   449 -------VLVAKNKESEKRETRKSESEMKEARKNESKKQEARKSESEKRETRKSESEMKEARKNE 506

  Fly  4493 QHLKKCLTGELTSDWQQLSLPRVLGKLSNVLLVLKHSHFEGKD--KLLCVRRAIGLLPVLEQYQL 4555
            ..:|:....|        |..|...|..:.::..:.:..|.|:  |....||.            
Zfish   507 SEMKEARKSE--------SEKRETRKSESEMIEARKNESEMKEARKSESERRE------------ 551

  Fly  4556 LADYLLLQQLATHKVSAKMLSIVLTVFVEIGSKGFCVPPDLMQDEEGQSKQESKNGEGFGLEDGT 4620
                 .....|..|.:.|..|.:..:...         .:..:..:..|:.|:||.|....|.|.
Zfish   552 -----TKNSEAEIKEARKNESEIEAIRSN---------SEKRETRKSDSEMEAKNNESEKREAGK 602

  Fly  4621 GENDASDKIESEDQLDDAKRPEDRKDEGDKQEPDCKE----EKGIEMSDDFDAKMQDVEKPEED- 4680
            .|::..:..::|.:..:|::.|.||.|.|.:|...||    |..|:::.|.|::.::..|.|.: 
Zfish   603 SESEMKEARKNESEKKEARKRETRKSESDMKEAKRKETRKSESEIKVAKDNDSEKRETTKNESEI 667

  Fly  4681 ----------DSGESEEE-EDLNKEMGETEEG--------------AEKLDDQI--WGDDEEEKP 4718
                      ::|:||.| ::..|...|.||.              |.|.:.:|  ..|::.||.
Zfish   668 EAKNKESEKREAGKSESEIKEARKNESEKEEARKRETRKSESDMKEARKNESEIKVAKDNDSEKR 732

  Fly  4719 EEEQ-----EPDMNEEDQGKGSKDEKDAHNDLDT--------KNDAAKEDGKDEHEKDGLDATNE 4770
            |..|     |...||.::.:..|.|.:......|        ||::.||..:||.||        
Zfish   733 ETRQNEFEIETKNNESEKRETRKSESEMKEARKTDSEIIEAKKNESEKESKRDESEK-------- 789

  Fly  4771 PSGEDKRKEQAKDIDDMKDPEMDEEQTNAMHNELE-----------------------EPPEPEE 4812
                   :|..|:..:||:...:|.:..|:.||.|                       |..|.::
Zfish   790 -------RETRKNESEMKEARKNESEKRAIRNESEKRETKSQSEIKESEKREARNIESEKKEAKK 847

  Fly  4813 MDLGDMNNVDEGHDDQDEQPTDEN---------PFDIDAMKENMQPAEEPEADGDDEHDANEEGD 4868
            :| .:|....:...::.|....|:         ....::.|:.::.:|..:.:.:.:.:...|.:
Zfish   848 ID-SEMKQARKNESEKKEARKSESEKKEAERVETRKTESEKKEVRKSESEKKEAERKLERKSESE 911

  Fly  4869 -PQSDGSDSEEDEA---GTEAKPAEEDHGEGEEA-TPEDEKDEA---ETQKRGELEDEDDSKPED 4925
             .::..|:||..||   .:|.|.|.....|.:|| ..|.||.||   |::||.....|.:.|...
Zfish   912 RKEAKKSESENKEARGNESEKKGARRSESEKKEARQSESEKKEARRSESEKRENRRSESEKKEAR 976

  Fly  4926 SPEDSKEE---KEEKRE------EKPEEHSQSKDKASKEENVQSMPETDQSSSADQVQQPQDPDI 4981
            ..|..|.|   :.||||      ||.|...:..:|...........||.:|.|  :.::|:....
Zfish   977 RNESEKRETRSESEKRETRRNESEKREPRWRESEKKETRRRESEKKETRRSES--EKKEPRSESK 1039

  Fly  4982 KQDQKLDEQETGE----------------EKDGVGQAENDADDGGHQGVAETQETVSQEDRKNER 5030
            |::.:..|.|..|                ||.....:|:|..:      |:..|:..:|.|::|.
Zfish  1040 KKEARRSESEKKEARRSEFEKKEARRSEFEKKEARMSESDKKE------AKRNESEKKEARRSEF 1098

  Fly  5031 QTQEKRKQGRTNEERSLGEAEQNKLKQLKTIDQLKDSKESDDA-------------EQEKPEPMD 5082
            :.:|.|:.....:|..:.|:|:.:..:.:..:..::..|..||             |.||.|...
Zfish  1099 EKKEARRSEFEKKEARMSESEKARRSEFEKKEARRNESEKKDARRNESEKKEARRNESEKKEARS 1163

  Fly  5083 QTEAEEYQHVKEPKNSDKTTLDNATEEQSKKIQHQEDEP-PNEEEIEAENVD-ELMEAEEPAVDP 5145
            ::|.:|.:..:..||..:.  :.:.:::.::|:.::.|. .|:.|.||...| ||.||.      
Zfish  1164 ESEKKEARRNESEKNEGRR--NESEKKEERRIESEKKEARKNKSEKEARRSDSELKEAR------ 1220

  Fly  5146 EDDAELEQLGAEKTEQKSDKPSKTEKSKEQLETPEGMEIEGEVVLTMTVPRSSE-TTAHSNSEIL 5209
            ..::||::....::|:|.::..::||.:.:....|......:..|.....:.|| ..|..|..:.
Zfish  1221 RKESELKEARRNESEKKEERRIESEKKEARKNKSEKEARRSDSELKEARRKESELKEARRNESVK 1285

  Fly  5210 LDKSSHAEDLSSAEQ-----------IELRQQYQKQLTTFRVAQPEHEDYETWQGISNRMTQNAR 5263
            .|....|.:.:.||:           :|.|::...:....:...|...| ||.:....|..:..:
Zfish  1286 SDAEKDAVEKNKAEKNKLPEKRKEINVEERRETMTKPKQTKSCAPVSSD-ETQEEKKPRDEERCK 1349

  Fly  5264 ELCEQLRLILEPTK--CTRLKGDYRTGRRINMKKIIPYIASQFRKDKIWLRRTKPAQRDYKIT-- 5324
            .|.|:.:.:|:..:  .|..:|...:|.....:...|      ||::.. |..:||:.:.|.|  
Zfish  1350 ILAEKRQSVLKSLQGLVTSTRGKTPSGSEQTTETKEP------RKERNH-RLKQPAEDEKKDTEK 1407

  Fly  5325 -------------------------IAIDDS--KSMHHNNSKTLTLEAISLVSQALTLLESGRLS 5362
                                     :::.||  ..:|.:...::|||... ||:.|:.|:  .||
Zfish  1408 RKEQEKRNTEQQISSSKEEERRAHSLSVTDSLLYRLHGDIRISMTLENPD-VSKCLSALD--ELS 1469

  Fly  5363 IVSFGEAPQIILNHTEQFD 5381
            .|..  :.:.|.||:|..|
Zfish  1470 NVPV--SSRNIQNHSELID 1486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13185NP_001097279.2 MDN1 298..5521 CDD:227596 318/1579 (20%)
P-loop_NTPase 315..505 CDD:304359
P-loop_NTPase <887..972 CDD:304359
P-loop_NTPase 1147..1283 CDD:304359
P-loop_NTPase 1454..1603 CDD:304359
P-loop_NTPase 1795..1946 CDD:304359
P-loop_NTPase <2335..>2378 CDD:304359
Prothymosin 4843..4920 CDD:281265 23/84 (27%)
PHA03151 4856..5060 CDD:177546 56/236 (24%)
MttA_Hcf106 <5046..5166 CDD:294511 28/134 (21%)
vWA_midasin 5261..5526 CDD:238737 32/152 (21%)
psip1bXP_021325735.1 HDGF_related 14..93 CDD:99895 318/1579 (20%)
Neuromodulin_N <221..921 CDD:331332 154/809 (19%)
Neuromodulin_N <586..1321 CDD:331332 167/766 (22%)
LEDGF 1440..1534 CDD:314400 16/52 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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