DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13185 and zranb2

DIOPT Version :9

Sequence 1:NP_001097279.2 Gene:CG13185 / 36268 FlyBaseID:FBgn0033661 Length:5526 Species:Drosophila melanogaster
Sequence 2:XP_017211949.1 Gene:zranb2 / 406716 ZFINID:ZDB-GENE-040426-2743 Length:324 Species:Danio rerio


Alignment Length:293 Identity:58/293 - (19%)
Similarity:109/293 - (37%) Gaps:63/293 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly  4754 EDGKDEHEKD-GLDATNEPSGED------KRKEQAKDIDDMKDPEMDE---------EQTNAMHN 4802
            |.||...||. ||.:.|:...:.      .|:.:....:..|..:::|         |:.|.::|
Zfish    51 EIGKTLAEKSRGLFSANDWQCKTCGNVNWARRSECNMCNTPKYAKLEERTGYGGGFNERENLVYN 115

  Fly  4803 ELEEPPEPEEMDLGDMNNVDEGHDDQDEQPTDENPFDIDAMKENMQPAEEPEADGDDEHDANEEG 4867
            |.|| .:.|..:.|.:.....|...:|....:| |..:|             .|.::|.|.:|:|
Zfish   116 EREE-SDGEYDEFGRIKKKFRGKTKKDSDKKEE-PKKVD-------------QDDEEEDDDDEDG 165

  Fly  4868 DPQS---DGSDSEEDEAGTEAKPAEEDHGEGEEATPEDEKDEAETQKRGELEDEDDSKPEDSPED 4929
            |...   |..|.::|:                   .:|::|:|:..|. :|:|.|:.|...|...
Zfish   166 DLSKYKLDDDDEDDDD-------------------DDDDEDDADLSKY-DLDDGDEKKGSHSGSS 210

  Fly  4930 SKEEKEEKREEKPEEHSQSKDKASKEENVQSMPETDQSS-----SADQVQQPQDPDIK----QDQ 4985
            ....:......:....|:|:..:|.....:|..::..||     ||...::.:.|...    |.:
Zfish   211 RSSSRSSSSSSRSRSRSRSRSSSSSRSRSRSRSKSRSSSRSGKGSASSKKRSRSPSSSPEGGQKR 275

  Fly  4986 KLDEQETGEEKDGVGQAENDADDGGHQGVAETQ 5018
            ......:|..|....::.:....|...||.:|:
Zfish   276 SRSRSSSGGRKKRRARSHSSERFGVTHGVLDTR 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13185NP_001097279.2 MDN1 298..5521 CDD:227596 58/293 (20%)
P-loop_NTPase 315..505 CDD:304359
P-loop_NTPase <887..972 CDD:304359
P-loop_NTPase 1147..1283 CDD:304359
P-loop_NTPase 1454..1603 CDD:304359
P-loop_NTPase 1795..1946 CDD:304359
P-loop_NTPase <2335..>2378 CDD:304359
Prothymosin 4843..4920 CDD:281265 15/79 (19%)
PHA03151 4856..5060 CDD:177546 34/175 (19%)
MttA_Hcf106 <5046..5166 CDD:294511
vWA_midasin 5261..5526 CDD:238737
zranb2XP_017211949.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.