DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13185 and ncm

DIOPT Version :9

Sequence 1:NP_001097279.2 Gene:CG13185 / 36268 FlyBaseID:FBgn0033661 Length:5526 Species:Drosophila melanogaster
Sequence 2:NP_609877.2 Gene:ncm / 35099 FlyBaseID:FBgn0086707 Length:1330 Species:Drosophila melanogaster


Alignment Length:1174 Identity:229/1174 - (19%)
Similarity:376/1174 - (32%) Gaps:353/1174 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  3964 DSAKLRRSPIEKKLKEFVKIQSYSKDLSYFSMRNSVASVHRNLNKFLKEYRLSI---QEKISEVF 4025
            ||.:.:|||..|:.:.    .|..|..|..:.|::..:.....|:.:.|....|   |.|..:|.
  Fly   322 DSREKKRSPERKRDRS----SSTPKSKSSKTPRHTETTETNADNETVTEPAAKITERQRKTVDVL 382

  Fly  4026 QPKDSTAKDYTFG---------------TDKG-------------KGLRNY-NKIKYLHTE---- 4057
            ..:       |.|               |||.             |.:..| ||:...:..    
  Fly   383 TSR-------TGGAYIPPAKLRMMQSQITDKSSAAYQRIAWEALKKSIHGYINKVNVTNIAIITR 440

  Fly  4058 ---RQQFVASEKLLEKFAIQEEFLS---------------------DNTLLQRLDKHFRTA---- 4094
               |:..|....||.:..||.:..|                     ...||:||...||.|    
  Fly   441 ELLRENIVRGRGLLSRSIIQAQAASPTFTHVYAALVSIINSKFPNIGELLLKRLVIQFRRAFRRN 505

  Fly  4095 ------------RHVVKETLGQVPYGELITELDDLLASQLERCEHLRSLNVDRSKERPQQ----- 4142
                        .|:|.:   :|.:..|..|:..||.                  |.|..     
  Fly   506 DKMVCMSATRFIGHLVNQ---RVAHEILALEILTLLV------------------ETPTDDSVEV 549

  Fly  4143 -----KQEAKQILQQKRKALTDLFKMLHRL--------GANYKTGLLELSLRNEFEDFQLPPYSI 4194
                 |:...::.:...|.:..:|:||..:        ...|...:|....::.|:|.|      
  Fly   550 AIAFLKECGMKLTEVSSKGIGAIFEMLRNILHEGKLDKRVQYMIEVLFQIRKDGFKDHQ------ 608

  Fly  4195 RSMLPRLHPTAQ--------QLDEHLDLYYMKSVFKLKLLQNIMLTPLSELGPPNIERIKGFAVD 4251
             :::|.|....:        .|||..:...:.:|||           ..:....|.::.||.:  
  Fly   609 -AVVPELELVEEDDQFTHLMMLDEATETEDILNVFK-----------FDDNYAENEDKYKGLS-- 659

  Fly  4252 LFLLVQQQREHL-----------SGSTKELHELRNSLDSLRKLAEIIPQADINPST-LNFVKSAD 4304
                    ||.|           |||..:......|.....|.||   ..||..|| .|.:.   
  Fly   660 --------REILGSDDGSSSGSGSGSDSDSDSDGESGSDAEKKAE---AGDIIDSTETNLIA--- 710

  Fly  4305 IAMEIKQHLRQIHYVLKQWKLLLSCAPSSFIEESENRLLVRKISLAQSELHSLCIQILNSSQELL 4369
                    ||:..|        |:...|...||..::|:  |:.|...:...||...|:...|..
  Fly   711 --------LRRTIY--------LTINSSLDYEECAHKLM--KMQLKPGQEIELCHMFLDCCAEQR 757

  Fly  4370 NELNNANLEYLSSEKCVTYQKSYAEIQE---NIKKTLELLRTGQNDYLPLAQPIVELLDSVQLKN 4431
                             ||:|.|..:.:   ||.|.          |:|   |..|:........
  Fly   758 -----------------TYEKFYGLLAQRFCNINKI----------YIP---PFEEIFKDTYQTT 792

  Fly  4432 HTEIAPEAIDLANADTELANIAHSVLMSMQKIYKHHVKTDEVNQNG----EAKEQDEESKEALQE 4492
            |           ..||       :.|.::.|.:.|.:.||.::.:.    :..|.|..|...:  
  Fly   793 H-----------RLDT-------NRLRNVSKFFAHLLFTDAISWDVLECIQLNEDDTTSSSRI-- 837

  Fly  4493 QHLKKCLTGELTSDWQQLSLPRVLGKLSNVLLVLKHSHFEGKDKLLCVRRAIGLLPVLEQYQLLA 4557
              ..|.|..||.   :.:.|.::..||.:.:||...:....||.....|.:|.....:....|..
  Fly   838 --FIKILFQELA---EYMGLGKLNAKLKDDVLVESIAGLFPKDNPRNTRFSINFFTSIGLGGLTD 897

  Fly  4558 DYLLLQQLATHKVSAKMLSIVLTVFVEIGSKGF----------CVPPDLMQDEEGQSKQESKNGE 4612
            |.....:.|...|.|    |...:....|...|          .|.|.........|..:|    
  Fly   898 DLRRFLKNAPKSVPA----INAEILANAGGNPFRDGSAPAGNTKVAPSSSSSSSSSSDTDS---- 954

  Fly  4613 GFGLEDGTGE---NDASDKIESEDQLDDAKRPEDRKDEGDKQEPDCKEEKGIEMSDDFDAKMQDV 4674
                ||.:.|   :|:|.:..|.|...:.|:...|||:..|:.....:||..:..:....|..:.
  Fly   955 ----EDSSEEDSSSDSSSESSSSDSSSEPKKKRKRKDKDKKKSKKATKEKSKKTKNKKKKKKAEK 1015

  Fly  4675 EKPEEDD---SGESEEEEDLNKEMGETEEGAEKLDDQIWGDDEEEKPEEEQEPDMNEEDQGKGSK 4736
            |:.:|.:   ..:.|:|:| .|...|.::.|:|       ..:..:..:|.......||..|.:.
  Fly  1016 EQEKEKEKQRKSKKEKEKD-KKRKKEEKKAAKK-------KSKHRRKSQESSDSSGSEDSDKSTS 1072

  Fly  4737 DEKDAHNDLDTKNDA------------------AKEDGKDEHEKDGLDATN--EPSGEDKR---- 4777
            :..|:.|....::||                  .:....||...:|..:.|  :|:|..:|    
  Fly  1073 ESSDSSNSSSDESDAEPQAKIKRQEHVEKNKFRGRTQDSDEFNLEGPGSKNRFQPNGNGQRRRDN 1137

  Fly  4778 ---KEQAKDIDDMKDPE-------MDEEQTNAMHNELEEPPEPEEMDLGDMNNVDEGHDDQ---D 4829
               :|:.:: :...|.|       .|.|:.....:...|.......|....|.....||.|   |
  Fly  1138 STGRERNRE-NSSYDRERNRGNSSYDRERKRGNSSYDRERNRESSYDKERKNRNAVAHDRQRKRD 1201

  Fly  4830 EQPTDENPFDIDAMKENMQPAEEPEADGDDEHDANEEGDPQSDGSDSEEDEAGTEAKPAEEDHGE 4894
            ...:.|.|    .::||..|.|:.......|.| :..||..|....|:..|        ..|.||
  Fly  1202 RSRSYERP----TIRENSAPREKRMESSRSEKD-SRRGDRSSRNERSDRGE--------RSDRGE 1253

  Fly  4895 ----GEEATPEDEKDEAETQKRGELED--EDDSKPEDSPEDSKEEKEEKREEKPEEHSQSKDKAS 4953
                ||.:...:..|..|...|||..|  ::.|:.::...|...:.:.:||.|.|....|:|::.
  Fly  1254 RSDRGERSDRGERSDRGERSDRGERSDREKERSRAKERERDRDRDLKGQRERKRERDDGSRDRSR 1318

  Fly  4954 KEEN 4957
            :|.:
  Fly  1319 RERS 1322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13185NP_001097279.2 MDN1 298..5521 CDD:227596 229/1174 (20%)
P-loop_NTPase 315..505 CDD:304359
P-loop_NTPase <887..972 CDD:304359
P-loop_NTPase 1147..1283 CDD:304359
P-loop_NTPase 1454..1603 CDD:304359
P-loop_NTPase 1795..1946 CDD:304359
P-loop_NTPase <2335..>2378 CDD:304359
Prothymosin 4843..4920 CDD:281265 22/82 (27%)
PHA03151 4856..5060 CDD:177546 27/108 (25%)
MttA_Hcf106 <5046..5166 CDD:294511
vWA_midasin 5261..5526 CDD:238737
ncmNP_609877.2 MIF4G 421..602 CDD:214713 34/201 (17%)
MA3 711..817 CDD:280933 33/163 (20%)
PHA02896 <1107..1300 CDD:165222 45/206 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.