DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13185 and CG18258

DIOPT Version :9

Sequence 1:NP_001097279.2 Gene:CG13185 / 36268 FlyBaseID:FBgn0033661 Length:5526 Species:Drosophila melanogaster
Sequence 2:NP_573201.1 Gene:CG18258 / 32708 FlyBaseID:FBgn0265267 Length:468 Species:Drosophila melanogaster


Alignment Length:482 Identity:95/482 - (19%)
Similarity:150/482 - (31%) Gaps:157/482 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  2127 KVYLNDVVLSRKQADVL--DLVNRQEQSPLLLDSQRQQLKQIIETVHMEKPLLLCGSTDSGKTKL 2189
            |:.::....|.|..|.:  |:.|..:....|.||...                   ..|..:.|.
  Fly    42 KLIVSQNAESSKDTDAIETDISNEHDPRDALKDSSSP-------------------DADVLRNKT 87

  Fly  2190 IDALCVLSNRLCNTDI-IDDSVT-------GSFQQIDLNRHLEIIYKKV---------ETLVFSC 2237
            .:.|..|:|:..||.. :|||.:       .|:|:..|||..:.:.:.|         .||.:.|
  Fly    88 TEGLISLNNKAENTMTGLDDSESLKLARPASSYQEALLNRLQDQLNQFVVGLPLDLGFSTLNYIC 152

  Fly  2238 -----------------VQRAFVLHTQSEF---------VEQLWNNWSMYNKLAKV------TTE 2270
                             .:.:|:|.:..:.         .|||||....|.....|      || 
  Fly   153 STIVDLGVVRSKLIPDMSRMSFLLRSSDDCQNTSIPLTQAEQLWNTTGFYQDRPTVLFITGWTT- 216

  Fly  2271 AQQHSVLDELKLFSERLGSLGKIIEVLEATPQNCQVRALQQLAEIKSQLLLLQ--TYIKTA---D 2330
                      .:.:...|.:.|                 ..|....:.:|:|.  .:|.|.   .
  Fly   217 ----------SINNSNSGPVAK-----------------AYLCRNDTNVLILDAANFIDTLYTWS 254

  Fly  2331 SLNTGGSFEWVDSQIV---TSLKCGQYILLEH---VNLCSSA-----------------VLDRLN 2372
            :|||....:::...::   ||....|:.|:.|   ..:..||                 .||..|
  Fly   255 ALNTEVIGDYLAKALLRLNTSYVTKQFHLVGHSLGAQIAGSAGRNYRRLSGGQILKRITGLDPAN 319

  Fly  2373 PVFEPNGSLLIAEKGISAQDSAEVVYKSTNFRAFLTVDPKNGELSRAMRNR------CVELSLSR 2431
            |.|.....|    :|:.:.|:..|....||...|.| ..:.|:....::.|      |..|    
  Fly   320 PCFYDGNEL----EGLRSGDARFVDIIHTNPGMFGT-SKRAGDADFFVQGRIPFKPGCESL---- 375

  Fly  2432 DTYSVDDLRAFVH-EQGVREMEAIDCILRVHKGLSQLTEFNNYSISHLTQFAFLSAAYRRIGYEL 2495
            |..|....||..: .:.|......|.:.:..|..|:|. ..||..:..|.          :||..
  Fly   376 DPISCSHQRAVDYWTETVYPSNGNDFLAKRCKRYSELL-LGNYCKNTNTV----------MGYAA 429

  Fly  2496 KRA----IYVAAMEVYVYSANTDLMGY 2518
            |..    .||.|.....|..|.:|..|
  Fly   430 KATDLGLFYVGANPEEPYGQNANLQSY 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13185NP_001097279.2 MDN1 298..5521 CDD:227596 95/482 (20%)
P-loop_NTPase 315..505 CDD:304359
P-loop_NTPase <887..972 CDD:304359
P-loop_NTPase 1147..1283 CDD:304359
P-loop_NTPase 1454..1603 CDD:304359
P-loop_NTPase 1795..1946 CDD:304359
P-loop_NTPase <2335..>2378 CDD:304359 12/65 (18%)
Prothymosin 4843..4920 CDD:281265
PHA03151 4856..5060 CDD:177546
MttA_Hcf106 <5046..5166 CDD:294511
vWA_midasin 5261..5526 CDD:238737
CG18258NP_573201.1 Pancreat_lipase_like 172..443 CDD:238363 63/318 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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