DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13185 and Yp1

DIOPT Version :9

Sequence 1:NP_001097279.2 Gene:CG13185 / 36268 FlyBaseID:FBgn0033661 Length:5526 Species:Drosophila melanogaster
Sequence 2:NP_001285071.1 Gene:Yp1 / 31939 FlyBaseID:FBgn0004045 Length:439 Species:Drosophila melanogaster


Alignment Length:481 Identity:82/481 - (17%)
Similarity:154/481 - (32%) Gaps:179/481 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly  3030 VNPLYADQLLTLNSNLWHCLKTL----------ESANRTEITNAWIELKNEVNELQNYDEFAV-L 3083
            :||:....||.       ||...          .|.|:....:.|:. .:::..:...|:|.: .
  Fly     1 MNPMRVLSLLA-------CLAVAALAKPNGRMDNSVNQALKPSQWLS-GSQLEAIPALDDFTIER 57

  Fly  3084 LEKIGGGYKGLRSYQRQYRNSVQCYQLENLSTRLDCVQGPSEEGSTDISSQFCYRGPALSGVILS 3148
            ||.:        :.:|......|.|.|..:...::....||.                    |..
  Fly    58 LENM--------NLERGAELLQQVYHLSQIHHNVEPNYVPSG--------------------IQV 94

  Fly  3149 LICQPNGQLRSVPLSELLEWRSALQQTRHLIWENSQLLTSRYSGEVNNLLQAKENARQLLKEL-- 3211
            .:.:|||.....||:|:::   .|:|.::...:...::       |..|.|..|..::..::|  
  Fly    95 YVPKPNGDKTVAPLNEMIQ---RLKQKQNFGEDEVTII-------VTGLPQTSETVKKATRKLVQ 149

  Fly  3212 EYVRKLSEKEQK-----ANQGFENCAKELEKMIEKLEKEENNNASMTKDFEVSLTNALVGAIELC 3271
            .|:::.:.::|:     .||.:::         :..|:.:|...|..:|:...:.||...:.::.
  Fly   150 AYMQRYNLQQQRQHGKNGNQDYQD---------QSNEQRKNQRTSSEEDYSEEVKNAKTQSGDII 205

  Fly  3272 LLTNTPLIDPVEKNRLKNEYIAEDIDCLSTLTTAYDFMKIAMKYRHFGEEIYSELELRLRTALQR 3336
                  :||...|......|...||:            |...|...:..::.:||::.       
  Fly   206 ------VIDLGSKLNTYERYAMLDIE------------KTGAKIGKWIVQMVNELDMP------- 245

  Fly  3337 QQQLSQKLALRSEKCLYASLVQDITHFLHSNGDCESLYKLFQLIHSEWENFQGLHVATSAQLKSS 3401
                                                    |..||...:|. |.|||.:|     
  Fly   246 ----------------------------------------FDTIHLIGQNV-GAHVAGAA----- 264

  Fly  3402 IEVLGKLDLWLANAQRFVH---HTLSRYSAYYQDFVEPIKC---SVNQL----RFGLESLKVIFT 3456
                         ||.|..   |.|.|.:.     ::|.|.   |.|.|    |...|.:..|.|
  Fly   265 -------------AQEFTRLTGHKLRRVTG-----LDPSKIVAKSKNTLTGLARGDAEFVDAIHT 311

  Fly  3457 RVQQAGSVSQAEQMQQTIGDIVQFPS 3482
            .|...|:..::       ||:..:|:
  Fly   312 SVYGMGTPIRS-------GDVDFYPN 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13185NP_001097279.2 MDN1 298..5521 CDD:227596 82/481 (17%)
P-loop_NTPase 315..505 CDD:304359
P-loop_NTPase <887..972 CDD:304359
P-loop_NTPase 1147..1283 CDD:304359
P-loop_NTPase 1454..1603 CDD:304359
P-loop_NTPase 1795..1946 CDD:304359
P-loop_NTPase <2335..>2378 CDD:304359
Prothymosin 4843..4920 CDD:281265
PHA03151 4856..5060 CDD:177546
MttA_Hcf106 <5046..5166 CDD:294511
vWA_midasin 5261..5526 CDD:238737
Yp1NP_001285071.1 Abhydrolase 183..406 CDD:304388 43/244 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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