DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13185 and Sbp

DIOPT Version :9

Sequence 1:NP_001097279.2 Gene:CG13185 / 36268 FlyBaseID:FBgn0033661 Length:5526 Species:Drosophila melanogaster
Sequence 2:XP_038941215.1 Gene:Sbp / 25540 RGDID:3623 Length:367 Species:Rattus norvegicus


Alignment Length:203 Identity:59/203 - (29%)
Similarity:84/203 - (41%) Gaps:68/203 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  4732 GKGSKDEKDAHNDLDTKNDAAKEDGKDEHEKDGLDATNEPSGEDKRKEQAKDIDDMKDPEMDEEQ 4796
            |.|.| .|:.|:|.| .||..|||..|||:.|     ||....||        |:.||       
  Rat   232 GMGFK-WKNIHDDFD-DNDDDKEDDDDEHDDD-----NEEDHGDK--------DNDKD------- 274

  Fly  4797 TNAMHNELEEPPEPEEMDLGDMNNVDEGHDDQDEQPTDENPFDIDAMKENMQPAEEPEADGDDEH 4861
                |                    |:.|||.|:...|:|..|:|..:::....|| |.|.|.|:
  Rat   275 ----H--------------------DDDHDDDDDDKEDDNEEDVDDERDDKDDDEE-EDDNDKEN 314

  Fly  4862 DANE-EGDPQSDGSDSEEDEAGTEAKPAEEDHGEGEEATPEDEKDEAETQKRGELEDEDDSKPED 4925
            |.:: ||....|.:|.|:|:       .::|.|.|.:   :|:.|          :||||...:|
  Rat   315 DKDDGEGSGDDDDNDDEDDD-------KDDDGGSGND---DDDGD----------DDEDDDGGDD 359

  Fly  4926 SPEDSKEE 4933
            ...|.:||
  Rat   360 DNGDEEEE 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13185NP_001097279.2 MDN1 298..5521 CDD:227596 59/203 (29%)
P-loop_NTPase 315..505 CDD:304359
P-loop_NTPase <887..972 CDD:304359
P-loop_NTPase 1147..1283 CDD:304359
P-loop_NTPase 1454..1603 CDD:304359
P-loop_NTPase 1795..1946 CDD:304359
P-loop_NTPase <2335..>2378 CDD:304359
Prothymosin 4843..4920 CDD:281265 20/77 (26%)
PHA03151 4856..5060 CDD:177546 23/79 (29%)
MttA_Hcf106 <5046..5166 CDD:294511
vWA_midasin 5261..5526 CDD:238737
SbpXP_038941215.1 Jacalin_ZG16_like 110..238 CDD:187707 3/6 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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