| Sequence 1: | NP_001097279.2 | Gene: | CG13185 / 36268 | FlyBaseID: | FBgn0033661 | Length: | 5526 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_620252.1 | Gene: | Gabrr3 / 192258 | RGDID: | 621564 | Length: | 464 | Species: | Rattus norvegicus |
| Alignment Length: | 485 | Identity: | 85/485 - (17%) |
|---|---|---|---|
| Similarity: | 147/485 - (30%) | Gaps: | 200/485 - (41%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 15 LLELTA-NESEDNVFSQSLQKFIKKQKYVPQDVERLFRSLSEQL---------PLPAY---TVPI 66
Fly 67 AASFEEQLLLLLSMALRWDSASQRFHTYQLECVALSKLMNFSLDAQRFAKSYFHDKPAPFEKQQS 131
Fly 132 NGSLPSKKSKNGNHAADNLDDLELIKCCFQLLKSDTPYFRELWDWSSFIA----TYTHNSSSPKT 192
Fly 193 QLYCNYIVAMLTNMSAPQLNSLNEKISTKTRLEFDQEREQAWNTARNTLCSYTPDASDQLLNLHL 257
Fly 258 HGINKSVTNIEGVLLPTFNEE------NLEFYASTDGCYDRI----------------------- 293
Fly 294 -----------------VKVD---STVVNLRSIALGVAAAKP------------------ICLSG 320
Fly 321 PVGCGKTTLIEYLA-------------RKTGRI----------------CPKPNEIESREKALKK 356
Fly 357 AEEEEQLLTPKKKAKTTGS--------KRK 378 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG13185 | NP_001097279.2 | MDN1 | 298..5521 | CDD:227596 | 27/136 (20%) |
| P-loop_NTPase | 315..505 | CDD:304359 | 21/119 (18%) | ||
| P-loop_NTPase | <887..972 | CDD:304359 | |||
| P-loop_NTPase | 1147..1283 | CDD:304359 | |||
| P-loop_NTPase | 1454..1603 | CDD:304359 | |||
| P-loop_NTPase | 1795..1946 | CDD:304359 | |||
| P-loop_NTPase | <2335..>2378 | CDD:304359 | |||
| Prothymosin | 4843..4920 | CDD:281265 | |||
| PHA03151 | 4856..5060 | CDD:177546 | |||
| MttA_Hcf106 | <5046..5166 | CDD:294511 | |||
| vWA_midasin | 5261..5526 | CDD:238737 | |||
| Gabrr3 | NP_620252.1 | LIC | 58..463 | CDD:273305 | 78/445 (18%) |
| LGIC_ECD | 79..264 | CDD:355788 | 46/249 (18%) | ||
| Cys-loop | 181..195 | CDD:349787 | 1/13 (8%) | ||
| Interaction with SQSTM1. /evidence=ECO:0000269|PubMed:12431995 | 344..445 | 17/85 (20%) | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||