DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13185 and Pnliprp2

DIOPT Version :9

Sequence 1:NP_001097279.2 Gene:CG13185 / 36268 FlyBaseID:FBgn0033661 Length:5526 Species:Drosophila melanogaster
Sequence 2:NP_476554.1 Gene:Pnliprp2 / 117554 RGDID:620793 Length:482 Species:Rattus norvegicus


Alignment Length:269 Identity:55/269 - (20%)
Similarity:89/269 - (33%) Gaps:82/269 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  3048 CLKTLESANRTEITNAWIELKNEV--NELQNYDEFAVLLEKIGG--GYKGLRSYQRQYRNSVQCY 3108
            |.|.:.| ...:|...|...:|.|  |.|::|..:|..:....|  ||. ..||::..:|     
  Rat   269 CQKNILS-TIVDINGIWEGTQNFVACNHLRSYKYYASSILNPDGFLGYP-CSSYEKFQQN----- 326

  Fly  3109 QLENLSTRLDCVQGPSE------------EGSTDISSQFCYRGPALSGVILSLICQPNGQLRSVP 3161
                     ||...|.|            ||.|....|..|.....||                 
  Rat   327 ---------DCFPCPEEGCPKMGHYADQFEGKTATVEQTVYLNTGDSG----------------- 365

  Fly  3162 LSELLEWRSALQQT----RHLIWENSQLLTSRYSGEVNNLLQAKENARQLLKELEYVRKLSEKEQ 3222
              ....||..:..|    :.|   :..:|.:.| |...|..|.:.....|..|..:||.:   :.
  Rat   366 --NFTRWRYKVSVTLSGAKKL---SGYILVALY-GNNGNSKQYEIFKGSLKPEARHVRDI---DV 421

  Fly  3223 KANQGFENCAKELEKMIEKLEKEENNNASMTKDFEVSLTNALVGAIELCLLTNTPLIDPVEKNRL 3287
            ..|.|          .|:|::...||..       ::|....:||.::.:.:.   :|..|.|..
  Rat   422 DINVG----------EIQKVKFLWNNKV-------INLFRPTLGASQITVQSG---VDGKEYNFC 466

  Fly  3288 KNEYIAEDI 3296
            .::.:.||:
  Rat   467 SSDTVREDV 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13185NP_001097279.2 MDN1 298..5521 CDD:227596 55/269 (20%)
P-loop_NTPase 315..505 CDD:304359
P-loop_NTPase <887..972 CDD:304359
P-loop_NTPase 1147..1283 CDD:304359
P-loop_NTPase 1454..1603 CDD:304359
P-loop_NTPase 1795..1946 CDD:304359
P-loop_NTPase <2335..>2378 CDD:304359
Prothymosin 4843..4920 CDD:281265
PHA03151 4856..5060 CDD:177546
MttA_Hcf106 <5046..5166 CDD:294511
vWA_midasin 5261..5526 CDD:238737
Pnliprp2NP_476554.1 Lipase 31..367 CDD:278576 28/132 (21%)
Pancreat_lipase_like 65..363 CDD:238363 26/109 (24%)
PLAT_PL 370..482 CDD:238857 27/133 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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