DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13185 and zranb2

DIOPT Version :9

Sequence 1:NP_001097279.2 Gene:CG13185 / 36268 FlyBaseID:FBgn0033661 Length:5526 Species:Drosophila melanogaster
Sequence 2:NP_001136134.1 Gene:zranb2 / 100135715 XenbaseID:XB-GENE-966832 Length:356 Species:Xenopus tropicalis


Alignment Length:370 Identity:71/370 - (19%)
Similarity:119/370 - (32%) Gaps:124/370 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  4604 SKQESKNGEGFGLEDGTGEN-DASDKIESEDQLDDAKRPEDRKDEGDKQEPDCKEEKGIEMSDDF 4667
            :|.|.:.|.|.|..:  .|| :..::.||:.:.|:..| :.:|..|....|     |.|...|  
 Frog    94 AKLEERTGYGGGFNE--RENVEYIEREESDGEYDEFGR-KKKKYRGKPAVP-----KSILKGD-- 148

  Fly  4668 DAKMQDVEKPEEDDSGESEEEEDLNKEMGETEEGAEKLDDQIWGDDEEEKPEEEQEPDMNEEDQG 4732
                      |::..||.||:|||:|         .||||    |:|||:.|||:|.:       
 Frog   149 ----------EKESEGEEEEDEDLSK---------YKLDD----DEEEEEEEEEKEKE------- 183

  Fly  4733 KGSKDEKDAHNDLDTKNDAAKEDGKDEHEKDGLDATNEPSGEDKRKEQAKDIDDMKDPEMDEEQT 4797
               ||:|       ||.:..::|..:|.:.||                                 
 Frog   184 ---KDKK-------TKEEEEEDDDDEEDDDDG--------------------------------- 205

  Fly  4798 NAMHNELEEPPEPEEMDLGDMNNVDEGHDDQDEQPTDENPFDIDAMKENMQPAEEPEADGDDEHD 4862
                            ||...|...|..||...:.:..:        ...:......:.......
 Frog   206 ----------------DLSKYNLASEDEDDSKNKKSTHS--------SRSKSRSHSRSSRSSSQS 246

  Fly  4863 ANEEGDPQSDGSDSEEDEAGTEAKPAEEDHGEGEEATPEDEKDEAETQKRGELEDEDDSKPE--- 4924
            :......:|..|.|....:.:.::......|....::....:..:..:||........|.||   
 Frog   247 SRSRSRSRSRSSSSSRSRSRSSSREYSRSPGSKSRSSSRSHRGSSSPRKRSYASSRSSSSPERGK 311

  Fly  4925 ------DSPEDSKEEKEEKR-------EEKPEEHSQSKDKASKEE 4956
                  .|..|.|:::...|       ......||.|:..:||::
 Frog   312 KRSRSRSSSGDRKKKRSRSRSTERRRGSSSGSSHSGSRSSSSKKK 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13185NP_001097279.2 MDN1 298..5521 CDD:227596 71/370 (19%)
P-loop_NTPase 315..505 CDD:304359
P-loop_NTPase <887..972 CDD:304359
P-loop_NTPase 1147..1283 CDD:304359
P-loop_NTPase 1454..1603 CDD:304359
P-loop_NTPase 1795..1946 CDD:304359
P-loop_NTPase <2335..>2378 CDD:304359
Prothymosin 4843..4920 CDD:281265 6/76 (8%)
PHA03151 4856..5060 CDD:177546 18/117 (15%)
MttA_Hcf106 <5046..5166 CDD:294511
vWA_midasin 5261..5526 CDD:238737
zranb2NP_001136134.1 ZnF_RBZ 11..35 CDD:197784
RanBP2-type Zn finger 13..34 CDD:275376
ZnF_RBZ 67..91 CDD:197784
RanBP2-type Zn finger 69..88 CDD:275376
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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