DRSC/TRiP Functional Genomics Resources

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Protein Alignment Twdlbeta and TwdlD

DIOPT Version :9

Sequence 1:NP_610707.2 Gene:Twdlbeta / 36265 FlyBaseID:FBgn0033658 Length:198 Species:Drosophila melanogaster
Sequence 2:NP_651492.1 Gene:TwdlD / 43210 FlyBaseID:FBgn0039444 Length:256 Species:Drosophila melanogaster


Alignment Length:238 Identity:57/238 - (23%)
Similarity:93/238 - (39%) Gaps:68/238 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQTQCILLLLAASLAICVARPEPPRSRYGPPPPPAPQKEYGPPAPAAQPL-------PVYGPPAA 58
            |:...:|.|||.|   |.|      .:.|        ..|.|.|.|.:.|       .|.|...:
  Fly     1 MRAFIVLCLLAVS---CSA------DKLG--------YNYQPVAHADEGLSFLPGSGQVIGELPS 48

  Fly    59 FYGPPAASEALVTKNVYVHVPPE--------EPEFYPASSP------------IQTAVPKKHYKI 103
            ...|..:.||::::.:...|.|:        :.|||..::|            |..:: ||:.::
  Fly    49 QVLPVQSGEAVLSQPIEAPVAPQIAPLVEEFQKEFYSYAAPEEQYDEGASNQQIANSL-KKNLRV 112

  Fly   104 IFIKAPNPPTPVRQVLPPPVQD-EHKTLVYVLVKKPE----EQQPVILPAPEPTEPSKPEVYFIK 163
            :||:.|......|..|....|. :.:|.:|||.|:.:    .:|   |.|.:.:..:||||:|:|
  Fly   113 VFIRTPENQGFERAALQLAKQSAQQETAIYVLTKQSDVSNLAKQ---LNALKTSSTNKPEVHFVK 174

  Fly   164 YK------QQQAKPATQYGPPPS---------APSEEYGAPPA 191
            |:      ..|.....||...|.         ||...:.:.||
  Fly   175 YRTPEDAANAQLAIQNQYNQLPGVSRISNEGRAPVLNFASSPA 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TwdlbetaNP_610707.2 DM5 68..167 CDD:214776 31/129 (24%)
TwdlDNP_651492.1 DM5 78..178 CDD:214776 28/103 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR31927
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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