DRSC/TRiP Functional Genomics Resources

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Protein Alignment Twdlbeta and TwdlJ

DIOPT Version :9

Sequence 1:NP_610707.2 Gene:Twdlbeta / 36265 FlyBaseID:FBgn0033658 Length:198 Species:Drosophila melanogaster
Sequence 2:NP_651489.2 Gene:TwdlJ / 43206 FlyBaseID:FBgn0039440 Length:274 Species:Drosophila melanogaster


Alignment Length:232 Identity:55/232 - (23%)
Similarity:83/232 - (35%) Gaps:69/232 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 RPEPPRSRYGPPPPPAPQKEYGP-PAPAAQPLPVYGPPAAFYGPPAASEALVTKNVYVHVPPEEP 83
            :|....|...|...|||.:.:|| |:..|..|.  |..:|.....||.:|.:.|..:.:. .:|.
  Fly    38 QPSGSASSDAPAFAPAPSESFGPGPSSIADALE--GSQSAAAPNYAAPQAQLEKEFFTYT-ADEG 99

  Fly    84 EFY-PASSPIQTAVPKKHYKIIFIKAPNPPTPVRQVLPPPVQ-DEHKTLVYVLVKKPEEQQPVI- 145
            :|| ||:|........|..:::|||.|.........|....| .:.:|.:|||.|:.:     | 
  Fly   100 DFYDPAASDRVANAVNKGLRVVFIKGPENRGLEDAALALAKQAAQQETAIYVLNKQAD-----IG 159

  Fly   146 -----LPAPEPTEPSKPEVYFIKYK---------------------QQQAK-------------- 170
                 |.:......:||||:|:||:                     ..||:              
  Fly   160 DLANKLNSIRNNNNNKPEVHFVKYRTPEDAANAQSAIQGQYDQLGGSSQAQDGGVASTLNFASQP 224

  Fly   171 ---------------PATQYGPPPSAPSEEYGAPPAP 192
                           ||:|  |..:||...|..|..|
  Fly   225 APVQAASSQAPAQFLPASQ--PEATAPISSYVPPATP 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TwdlbetaNP_610707.2 DM5 68..167 CDD:214776 29/127 (23%)
TwdlJNP_651489.2 DM5 85..186 CDD:214776 29/106 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR31927
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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