DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Twdlbeta and TwdlV

DIOPT Version :10

Sequence 1:NP_610707.2 Gene:Twdlbeta / 36265 FlyBaseID:FBgn0033658 Length:198 Species:Drosophila melanogaster
Sequence 2:NP_649446.1 Gene:TwdlV / 40537 FlyBaseID:FBgn0037227 Length:251 Species:Drosophila melanogaster


Alignment Length:188 Identity:62/188 - (32%)
Similarity:85/188 - (45%) Gaps:40/188 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LAIC-VARPEPPRSRYGPPPPPAPQKEYGPPAP----------AAQPLPVYGPPAAFYGPPAA-- 65
            |.:| ||...|....|.|.|     ..:|..:.          |.|..||  .|.|.|..|||  
  Fly     7 LCLCSVALAAPQGYNYNPGP-----SGFGGISTTTGGGSFFQGAVQVAPV--QPQAVYQQPAAQT 64

  Fly    66 ----------SEALVTKNVYVHVPPEEPEFYPASSPIQTAVPKKHYKIIFIKAP---NPPTPVRQ 117
                      .:|:|:|..::|..|||.|.| ....|...|||::|.::|||:|   |..|    
  Fly    65 HHHQQQQVQQQQAIVSKRFFIHSAPEEAEDY-KERHITVGVPKRNYNVVFIKSPQRNNRKT---- 124

  Fly   118 VLPPPVQDEHKTLVYVLVKKPEEQQPVILPAPEPTEPSKPEVYFIKYK-QQQAKPATQ 174
            :...|..:|.||::|||.||.|......: ..:.:..|||||:||||| .::|..|.|
  Fly   125 IKISPAANEEKTVIYVLSKKGESDLNAEV-VEQASSTSKPEVFFIKYKTNEEAAHAQQ 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TwdlbetaNP_610707.2 DM5 68..167 CDD:214776 40/102 (39%)
TwdlVNP_649446.1 DM5 78..173 CDD:214776 39/100 (39%)

Return to query results.
Submit another query.