DRSC/TRiP Functional Genomics Resources

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Protein Alignment Twdlbeta and Twdlalpha

DIOPT Version :10

Sequence 1:NP_610707.2 Gene:Twdlbeta / 36265 FlyBaseID:FBgn0033658 Length:198 Species:Drosophila melanogaster
Sequence 2:NP_728020.1 Gene:Twdlalpha / 326223 FlyBaseID:FBgn0052574 Length:388 Species:Drosophila melanogaster


Alignment Length:177 Identity:53/177 - (29%)
Similarity:78/177 - (44%) Gaps:17/177 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 YGPPPPPAPQKEYGPPAPAAQPLPVYGPPAAFYGPPAASEALVTKNVYVHVPPEEPEFYPASSPI 92
            :||.|      ..|..|.|....|.|.............|.::.|..:....|||.|....|..:
  Fly   137 FGPTP------NIGFGALAGYQAPTYQQQQEQEVQRGFQEPIIHKQFFTVAAPEEHENLERSKHL 195

  Fly    93 QTAVPKKHYKIIFIKAPNPPTPVRQVLPPPVQDEHKTLVYVLVKKPEEQQPVILPAPEPTEPSKP 157
            ....|:|:|:::|||||:......::.......|.||::|||.||..:.:...:..|.||.||||
  Fly   196 VIGRPQKNYRVVFIKAPSSSNANVKLSAEYAPKEEKTVIYVLSKKDNQLEVNDIATPAPTVPSKP 260

  Fly   158 EVYFIKYK--------QQQAKPATQYGP-PPSAPSEEYGAPPAPRTV 195
            ||:|||||        |||.:  .:|.. ..::..::.|..||...|
  Fly   261 EVFFIKYKTDAEASHAQQQIQ--AEYDRIEGTSEHQDGGVAPAQSVV 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TwdlbetaNP_610707.2 DM5 68..167 CDD:214776 36/106 (34%)
TwdlalphaNP_728020.1 DM5 171..270 CDD:214776 36/98 (37%)

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