DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sln and MCH4

DIOPT Version :9

Sequence 1:NP_610706.1 Gene:Sln / 36263 FlyBaseID:FBgn0033657 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_014522.1 Gene:MCH4 / 854030 SGDID:S000005479 Length:501 Species:Saccharomyces cerevisiae


Alignment Length:296 Identity:77/296 - (26%)
Similarity:130/296 - (43%) Gaps:44/296 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 RPLIAKSHELRSSR--------KSGSGSG--SGLNTARSRCVRRAKERERDRVTVARRSKQVVKD 208
            |.|.:|.||.:|:|        :.|..||  ...|.|.:...:.:.:.:.|...:...:.:|:..
Yeast    12 RFLFSKDHEAQSTRDHDVELETREGPSSGYNPNFNAADAILKKNSDQVDLDVNKLTNVTSRVLNT 76

  Fly   209 RDSSTTTTESGGPNVEPPDGGY-GWFIVFGAFSVQFWVAGLVKSYGVL--YVEIMETFPSSTATV 270
            .::|....:    :.|.||||. .|.:|||||.....|.||:.|.|.:  |:...:....|::|:
Yeast    77 PEASLIYDD----DREFPDGGLKAWLVVFGAFMGLVPVFGLINSLGAIESYISKHQLANISSSTI 137

  Fly   271 ASWIPAILSALCLVLAPLSSALCQR-----FSCR-TVVFVGGIFCAMGMILSYFATSLLHLLLTF 329
             |||.::..|:..:...||.....|     ..|. ||::.||:|....      ..|:...:|.|
Yeast   138 -SWIFSLYLAISFLSCILSGGYFDRNGSIGLMCTGTVIYAGGLFALAN------CKSVWQFILAF 195

  Fly   330 GVLTGIGGGLSTTPGIVIVSQYFDKHRALANGICVSGTAAGSFILPVLIKHLAENCGFHGTILIL 394
            .|.:|:|.|:..||.|..|:.:|.|.|.:|..|...|.:.|..:.|::::.|.:..||...|.||
Yeast   196 SVCSGLGTGILMTPLIGTVATWFLKRRGIATSISTMGGSIGGIVFPIMLRKLYKEVGFQWAIRIL 260

  Fly   395 GGCMLHVCVSATLYRPISAYTDQDSGQGQEETAKPL 430
            .    .:|::..:...:.|          .|..||:
Yeast   261 S----FICLTCLICASVLA----------RERTKPV 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlnNP_610706.1 MFS 235..>411 CDD:119392 52/183 (28%)
MFS <656..827 CDD:119392
MFS_1 658..>847 CDD:284993
MCH4NP_014522.1 MFS_MCT_SLC16 96..490 CDD:340910 57/208 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343234
Domainoid 1 1.000 72 1.000 Domainoid score I2205
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm13433
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.800

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