DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sln and MCH2

DIOPT Version :9

Sequence 1:NP_610706.1 Gene:Sln / 36263 FlyBaseID:FBgn0033657 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_012701.2 Gene:MCH2 / 853659 SGDID:S000001704 Length:473 Species:Saccharomyces cerevisiae


Alignment Length:647 Identity:108/647 - (16%)
Similarity:197/647 - (30%) Gaps:266/647 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 RAKERERDRVTVARRSKQVVKDRDSSTTTTESGGPNVEPPDGGYGWFIVFGAFSVQFWVAGLVKS 251
            |.::..||   |..:.....||..:..|:.     ::|.|||||||||:.......|...|....
Yeast     5 RHEDHHRD---VENKLNLNGKDDINGNTSI-----SIEVPDGGYGWFILLAFILYNFSTWGANSG 61

  Fly   252 YGVLYVEIME--TFPSSTATVASWIPAILSALCLVLAPLSSALCQRFSCRTVVFVGGIFCAMGMI 314
            |.:.....:|  ||...:....:.|..:..:..|..||:.:.|...||.:.::.:|.:|....::
Yeast    62 YAIYLAHYLENNTFAGGSKLDYASIGGLAFSCGLFFAPVITWLYHIFSIQFIIGLGILFQGAALL 126

  Fly   315 LSYFATSLLHLLLTFGVLTGIGGGLSTTPGIVIVSQYFDKHRALANGICVSGTAAGSFILPVLIK 379
            |:.|:.:|..:.||.|||.|.|......|.:.::..:|...|:||:||..:|:..|..:..:.::
Yeast   127 LAAFSVTLWEIYLTQGVLIGFGLAFIFIPSVTLIPLWFRNKRSLASGIGTAGSGLGGIVFNLGMQ 191

  Fly   380 HLAENCGFHGTILILGGCMLHVCVSATLYRPISAYTDQDSGQGQEETAKPLNEDINPSTTGILTT 444
            .:.:..|....  ::..|:  :|.|.                               ||..::.|
Yeast   192 SILQKRGVKWA--LIAQCI--ICTSL-------------------------------STIALMLT 221

  Fly   445 STYLDTCDVGAGHELSDKFIEHLFLEESKNHLNYYASKQPAQDKSAQESDDEVKDIIGETTFIKP 509
            .|                                                               
Yeast   222 RT--------------------------------------------------------------- 223

  Fly   510 MKKVRSSGLLHSVEDLSTDSTWVYRKHSGTDSNRGSRRRRNVFANDEVISKIQAHLEKPLSPPSV 574
                                           :::|.|:.:..:                      
Yeast   224 -------------------------------THQGLRQHKRSY---------------------- 235

  Fly   575 VSRGLSKSMEIPTPVSNLSDLKQQPVEQAELGILDSQLVESIIDGDGHLAADEDDDDDEERGPRT 639
                                                                             
Yeast   236 ----------------------------------------------------------------- 235

  Fly   640 CCERIEMYLDISLLQDPSFILMCLSVTLMSVGCPYMLYYLPAHVISIGYNKSEAGYLVAISAVLD 704
               :.|: ||..:|.:.:..|:...|:...:|...:||.|....:|:||...:..|:..:.:|..
Yeast   236 ---KFEL-LDYDVLSNFAVWLLFGFVSFAMLGYVVLLYSLSDFTVSLGYTSKQGSYVSCMVSVGS 296

  Fly   705 LIGRLGLGWLCD----------LQLFDRKKTYTLCILGAGCAVLTIPFAKTLVLVGLSAAVYGLC 759
            |:||..:|.:.|          |.|       .:.||   |..:.|| .|.|.    :|..:||.
Yeast   297 LLGRPIVGHIADKYGSLTVGMILHL-------VMAIL---CWAMWIP-CKNLA----TAIAFGLL 346

  Fly   760 LGS-----WYVLMPVLLADVFGTDRISSSYGLVRMFQSIGAISVPPLAGL---MRDLSG-DY 812
            :||     |..:..: :..:.|..::..::|...:|.:..|: |.|:.||   ..|.:| ||
Yeast   347 VGSIMGTIWPTIASI-VTRIVGLQKLPGTFGSTWIFMAAFAL-VAPIIGLELRSTDTNGNDY 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlnNP_610706.1 MFS 235..>411 CDD:119392 38/177 (21%)
MFS <656..827 CDD:119392 43/176 (24%)
MFS_1 658..>847 CDD:284993 43/174 (25%)
MCH2NP_012701.2 MFS_MCT_SLC16 41..428 CDD:340910 95/603 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - mtm13433
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
TreeFam 00.000 Not matched by this tool.
65.910

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