DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sln and Slc16a3

DIOPT Version :9

Sequence 1:NP_610706.1 Gene:Sln / 36263 FlyBaseID:FBgn0033657 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_110461.1 Gene:Slc16a3 / 80878 RGDID:620603 Length:471 Species:Rattus norvegicus


Alignment Length:656 Identity:133/656 - (20%)
Similarity:232/656 - (35%) Gaps:249/656 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   217 ESGGPNVEPPDGGYGWFIVFGAFSVQFWVAGLVKSYGVLYVEIMETFP---SSTATVASWIPAIL 278
            :.|...::.||||:||.::||.|.:..:.....|:..|.:.|:|..|.   |.||    ||.:||
  Rat     7 DEGPTGIKAPDGGWGWAVLFGCFIITGFSYAFPKAVSVFFKELMHEFGIGYSDTA----WISSIL 67

  Fly   279 SALCLVLAPLSSALCQRFSCRTVVFVGGIFCAMGMILSYFATSLLHLLLTFGVLTGIGGGLSTTP 343
            .|:.....||.|....||.||.|:.|||:|.::||:.:.|..|::.:.||.||:||:|..|:..|
  Rat    68 LAMLYGTGPLCSMCVNRFGCRPVMLVGGLFASLGMVAASFCRSIIQIYLTTGVITGLGLALNFQP 132

  Fly   344 GIVIVSQYFDKHRALANGICVSGTAAGSFILPVLIKHLAENCGFHGTILILGGCMLHVCVSATLY 408
            .::::::||:|.|.:|||:..:|:......|..|.:.|.::.|:.|..|||||.:|:.||.|.|.
  Rat   133 SLIMLNRYFNKRRPMANGLAAAGSPVFLCALSPLGQLLQDHYGWRGGFLILGGLLLNCCVCAALM 197

  Fly   409 RPISAYTDQDSGQGQEETAKPLNEDINPSTTGILTTSTYLDTCDVGAGHELSDKFIEHLFLEESK 473
            ||:.|                      |..:|             ||                  
  Rat   198 RPLVA----------------------PQASG-------------GA------------------ 209

  Fly   474 NHLNYYASKQPAQDKSAQESDDEVKDIIGETTFIKPMKKVRSSGLLHSVEDLSTDSTWVYRKHSG 538
                                                                             
  Rat   210 ----------------------------------------------------------------- 209

  Fly   539 TDSNRGSRRRRNVFANDEVISKIQAHLEKPLSPPSVVSRGLSKSMEIPTPVSNLSDLKQQPVEQA 603
                                                                             
  Rat   210 ----------------------------------------------------------------- 209

  Fly   604 ELGILDSQLVESIIDGDGHLAADEDDDDDEERGPRTCCERIEMYLDISLLQDPSFILMCLSVTLM 668
                                         |..||:....|:   ||:|:.:|..|::..::.::|
  Rat   210 -----------------------------EPHGPQRPSPRL---LDLSVFRDRGFLIYAVAASIM 242

  Fly   669 SVGCPYMLYYLPAHVIS----IGYNKSEAGYLVAISAVLDLIGRLGLGWLCDLQLFDRKKTYTLC 729
            .:|    |:..|..|:|    :|...::|.:|:.|...:|:..|...|::..|:   :.:.|::.
  Rat   243 VLG----LFVPPVFVVSYAKDMGVPDTKAAFLLTILGFIDIFARPTAGFITGLK---KVRPYSVY 300

  Fly   730 ILGAGCAVLTIPFAKTLVLVGLSAAVYG----LCL--GSWYVLMPVL----LADVFGTDRISSSY 784
            :..     ..:.|.....|.|.:|:.||    .|:  |..|.::..|    |..:.||.:.||:.
  Rat   301 LFS-----FAMFFNGFTDLTGSTASDYGGLVVFCIFFGISYGMVGALQFEVLMAIVGTQKFSSAI 360

  Fly   785 GLVRMFQSIGAISVPPLAGLMRDLSGDYEICFYCMGSCMVLGTTPLIVWSIL-EARNHRLFVQRE 848
            |||.:.:::..:..||..|.:.|.:..|:..|...|:.::..:..|::.:.. ..:..|..|.:.
  Rat   361 GLVLLLEAVAVLIGPPSGGKLLDATKVYKYVFILAGAEVLTSSLVLLLGNFFCIGKRKRPEVTKP 425

  Fly   849 EEECEE 854
            ||...|
  Rat   426 EEVASE 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlnNP_610706.1 MFS 235..>411 CDD:119392 65/178 (37%)
MFS <656..827 CDD:119392 41/184 (22%)
MFS_1 658..>847 CDD:284993 44/203 (22%)
Slc16a3NP_110461.1 MFS_MCT3_4 21..410 CDD:340988 123/619 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166339277
Domainoid 1 1.000 128 1.000 Domainoid score I5173
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR11360
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.850

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