DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sln and slc16a5b

DIOPT Version :9

Sequence 1:NP_610706.1 Gene:Sln / 36263 FlyBaseID:FBgn0033657 Length:855 Species:Drosophila melanogaster
Sequence 2:XP_001919658.1 Gene:slc16a5b / 794371 ZFINID:ZDB-GENE-131120-181 Length:547 Species:Danio rerio


Alignment Length:677 Identity:155/677 - (22%)
Similarity:240/677 - (35%) Gaps:224/677 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 SRKSGSGSGSGLNTARSRCVRRAKERERDRVTVARRSKQVVKDRDSSTTTTESGGPNVE-PPDGG 229
            ||.|...:....:||..:.....:|.|.:     :.|..:.::|..||    .|..|.: .||||
Zfish    19 SRASSLQAFENADTASCKSEEPDQEEEEE-----QSSSTLPEERHCST----GGQANAQLAPDGG 74

  Fly   230 YGWFIVFGAFSVQFWVAGLVKSYGVLYVEIMETFPSSTATVASWIPAILSALCLVLAPLSSALCQ 294
            :||.:|.....|...........|:.|.|:...|.:|. |..||:|||:.|:.....|:.|.|.:
Zfish    75 WGWVVVAATILVLAMTLAFPSCIGIFYTELQSDFQASN-TETSWVPAIMMAVLHACGPICSVLVE 138

  Fly   295 RFSCRTVVFVGGIFCAMGMILSYFATSLLHLLLTFGVLTGIGGGLSTTPGIVIVSQYFDKHRALA 359
            |..||..:.:|||...:||..|.||.:::.|.:|.|::||:|..|...|.|.:|..||.:.||.|
Zfish   139 RCGCRATIIIGGILSGLGMAASSFAQTMVELYITAGIITGMGFSLCFQPSITMVGHYFVRRRAFA 203

  Fly   360 NGICVSGTAAGSFILPVLIKHLAENCGFHGTILILGGCMLHVCVSATLYRPISAYTDQDSGQGQE 424
            |.:..:|||.|..|||:|..:|..|.|:.|:.|:|||.:|:.||...:.||::            
Zfish   204 NALSSTGTALGLSILPLLANYLLRNFGWRGSFLVLGGVLLNCCVCGAVMRPLA------------ 256

  Fly   425 ETAKPLNEDINPSTTGILTTSTYLDTCDVGAGHELSDKFIEHLFLEESKNHLNYYASKQPAQDKS 489
              |||..|           |.|                       :|:.||              
Zfish   257 --AKPKTE-----------TRT-----------------------KETDNH-------------- 271

  Fly   490 AQESDDEVKDIIGETTFIKPMKKVRSSGLLHSVEDLSTDSTWVYRKHSGTDSNRGSRRRRNVFAN 554
                                              .|.|:...|   |.|.   :|..|       
Zfish   272 ----------------------------------HLKTNCLSV---HQGL---KGRLR------- 289

  Fly   555 DEVISKIQAHLEKPLSPPSVVSRGLSKSMEIPTPVSNLSDLKQQPVEQAELGILDSQLVESIIDG 619
             ..:|.|...|.:                                                    
Zfish   290 -ATLSTIMTFLRR---------------------------------------------------- 301

  Fly   620 DGHLAADEDDDDDEERGPRTCCERIEMYLDISLLQDPSFILMCLSVTLMSVGCPYMLYYLPAHVI 684
              |:|.|                        .|..:|.|....|.|:.|.:|....|.||..:..
Zfish   302 --HMAFD------------------------LLCSNPYFCAYALGVSWMMLGFVVPLVYLVPYAT 340

  Fly   685 SIGYNKSEAGYLVAISAVLDLIGRLGLGWLCDLQLFDRKKTYTL-------------CILGAGCA 736
            :.|..:.:|..|:||..::::|.|.....:..|..|.....:..             |:.|.|.:
Zfish   341 AYGMEQDQAALLMAILGLINIIVRPATAIVFGLPRFRGSHNFAYLFAIAVVINGLSNCVCGIGTS 405

  Fly   737 VLTIPFAKTLVLVGLSAAVYGLCLGSWYVLMPVLLADVFGTDRISSSYGLVRMFQSIGAISVPPL 801
            .|.:  ...::|.|.|.::.|       .|:..:|.|.....|..|:.||:.:.:||..:..|||
Zfish   406 FLVL--LVYVILFGFSMSLVG-------SLLFTVLMDTVEMSRFPSALGLISIMESIMLLLGPPL 461

  Fly   802 AGLMRDLSGDYEICFYCMGSCMVLGTT 828
            ||::.|.:|.|...|:   :|.|.|:|
Zfish   462 AGILVDSTGQYIYVFF---ACSVTGST 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlnNP_610706.1 MFS 235..>411 CDD:119392 64/175 (37%)
MFS <656..827 CDD:119392 46/183 (25%)
MFS_1 658..>847 CDD:284993 47/184 (26%)
slc16a5bXP_001919658.1 2A0111 71..511 CDD:331689 142/616 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578863
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D518644at33208
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.950

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