DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sln and slc16a13

DIOPT Version :9

Sequence 1:NP_610706.1 Gene:Sln / 36263 FlyBaseID:FBgn0033657 Length:855 Species:Drosophila melanogaster
Sequence 2:XP_001920250.3 Gene:slc16a13 / 793210 ZFINID:ZDB-GENE-120907-2 Length:502 Species:Danio rerio


Alignment Length:637 Identity:143/637 - (22%)
Similarity:230/637 - (36%) Gaps:225/637 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 DRDSSTTTTESGGPNVEPPDGGYGWFIVFGAFSVQFWVAGLVKSYGVLYVEIMETFPSSTATVAS 272
            ::...|...:...|....||||:||.:|...|.:...|.||::|.||.:||.::.|..| |...|
Zfish     2 EKPQKTEEEQRPCPQGAAPDGGWGWVVVGALFVISALVFGLIRSLGVFFVEFVQYFDES-AQAVS 65

  Fly   273 WIPAILSALCLVLAPLSSALCQRFSCRTVVFVGGIFCAMGMILSYFATSLLHLLLTFGVLTGIGG 337
            ||.:|..|:..:::|:.:|....:..|.||.:||....:|.||:..|||||||.||.|:::|:|.
Zfish    66 WITSIGLAMQQLMSPIGAAASNVYGTRPVVMMGGFLSGLGFILASQATSLLHLYLTMGLISGLGW 130

  Fly   338 GLSTTPGIVIVSQYFDKHRALANGICVSGTAAGSFILPVLIKHLAENCGFHGTILILGGCMLHVC 402
            .|..||.:..|.|||.|.|:||.|:..:|....||....|.::|.|...:.|.:|||||...::.
Zfish   131 ALVFTPTMASVMQYFTKRRSLAMGLGFTGVGLASFAFSPLFQYLVEAYAWRGALLILGGLSFNMV 195

  Fly   403 VSATLYRPISAYTDQDSGQGQEETAKPLNEDINPSTTGILTTSTYLDTCDVGAGHELSDKFIEHL 467
            ....|.||:.                      .|........||.|:.|.               
Zfish   196 ACGALIRPLG----------------------TPKVAVKTENSTKLNKCS--------------- 223

  Fly   468 FLEESKNHLNYYASKQPAQDKSAQESDDEVKDIIGETTFIKPMKKVRSSGLLHSVEDLSTDSTWV 532
            ||                                                               
Zfish   224 FL--------------------------------------------------------------- 225

  Fly   533 YRKHSGTDSNRGSRRRRNVFANDEVISKIQAHLEKPLSPPSVVSRGLSKSMEIPTPVSNLSDLKQ 597
                                                          ||:..|             
Zfish   226 ----------------------------------------------LSRIYE------------- 231

  Fly   598 QPVEQAELGILDSQLVESIIDGDGHLAADEDDDDDEERGPRTCCERIEMYLDISLLQDPSFILMC 662
                                                      |.|       :|||....|:...
Zfish   232 ------------------------------------------CFE-------LSLLTHRGFVTYA 247

  Fly   663 LSVTLMSVG--CPYMLYYLPAHVISIGYNKSEAGYLVAISAVLDLIGRLGLGWLCDL---QLFDR 722
            :::|..:.|  .||:  :|.||...||:.:.:|.::::|:.|.|::||:..||..||   :|...
Zfish   248 VAITFFNAGYFIPYV--HLVAHSRHIGFTEYQAAFVISITGVADIVGRVASGWASDLGKIRLLHM 310

  Fly   723 KKTYTLCILGAGCAVLTIPFAKTLVLVGLSAAVYGLCLGSWYVLMPVLLADVFGTDRISSSYGLV 787
            ...:|..:   |.:::.||.|.....:.|.:.|||.|.|:...|...::.::.|.:|:..:.||:
Zfish   311 LVVWTGLL---GLSLMLIPVAVVYAGLLLVSIVYGFCAGAMAPLAFAVVPEIVGIERVLGALGLL 372

  Fly   788 RMFQSIGAISVPPLAGLMRDLSGDYEICFYCMGSCMVLG-----TTPLIVWS 834
            ::.:|.|.:...||:|.::|.:|.|.:.|...||.:::|     |.|.. ||
Zfish   373 QLIESAGGLLGAPLSGWLKDSTGTYTVSFIAAGSFLMIGMLIAMTLPYF-WS 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlnNP_610706.1 MFS 235..>411 CDD:119392 66/175 (38%)
MFS <656..827 CDD:119392 49/180 (27%)
MFS_1 658..>847 CDD:284993 53/187 (28%)
slc16a13XP_001920250.3 2A0111 11..443 CDD:331689 142/628 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578940
Domainoid 1 1.000 128 1.000 Domainoid score I5252
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.840

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