DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sln and Slc16a9

DIOPT Version :9

Sequence 1:NP_610706.1 Gene:Sln / 36263 FlyBaseID:FBgn0033657 Length:855 Species:Drosophila melanogaster
Sequence 2:XP_038955085.1 Gene:Slc16a9 / 687808 RGDID:1596295 Length:508 Species:Rattus norvegicus


Alignment Length:653 Identity:147/653 - (22%)
Similarity:237/653 - (36%) Gaps:208/653 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 PDGGYGWFIVFGAFSVQFWVAGLVKSYGVLYVEIMETFPSSTATVASWIPAILSALCLVLAPLSS 290
            ||||:||.||..:|..||...|...:.||||||.::.|.......| |:.::.|.:.|:.:|:.|
  Rat     7 PDGGWGWVIVVVSFFTQFLCYGSPLAVGVLYVEWLDAFGEGKGKTA-WVGSLASGVGLLASPVCS 70

  Fly   291 ALCQRFSCRTVVFVGGIFCAMGMILSYFATSLLHLLLTFGVLTGIGGGLSTTPGIVIVSQYFDKH 355
            .....|..|.|....|...|.|::||..|.::..|..::|::.|:|.||..|..:.|..||||..
  Rat    71 LFVSSFGARPVTIFSGFLVAGGLMLSSLAPNIYFLFFSYGIVVGLGCGLLYTATVTITCQYFDSR 135

  Fly   356 RALANGICVSGTAAGSFILPVLIKHLAENCGFHGTILILGGCMLHVCVSATLYRPI--------- 411
            |.||.|:..:|::.|.||...|.:.|.|..|..|.:||:|...|::....:|.||:         
  Rat   136 RGLALGLISTGSSVGLFIYAALQRMLIEFYGLDGCLLIVGALALNILACGSLMRPLQTSDCPFPE 200

  Fly   412 -----------SAY-----------TDQDSGQGQEETAKPLNEDINPSTTGILTTSTYLDTCDVG 454
                       |.|           |.||.|...|:...| |.|....|:        |.....|
  Rat   201 KIAPENVPDRYSIYNEKEKNQEETMTFQDKGYSNEDKCLP-NGDWGRETS--------LPKNPTG 256

  Fly   455 AGHELSDKFIEHLFLEESKNHLNYYASKQPAQDKSAQESDDEVKDIIGETTFIKPMKKVRSSGLL 519
            |.|                       :|:|...|         |.::.:|.|.|.:.|.:     
  Rat   257 AAH-----------------------TKEPEPYK---------KKVVEQTNFCKQLAKRK----- 284

  Fly   520 HSVEDLSTDSTW-VYRKHSGTDSNRGSRRRRNVFANDEVISKIQAHLEKPLS--PPSVVSRGLSK 581
                       | |||.:.|..:        ::|.|....:...|.|...:.  |||::...:::
  Rat   285 -----------WQVYRNYCGETA--------SLFKNKVFSALFVAILLFDIGGFPPSLLMEDVAR 330

  Fly   582 SMEIPTPVSNLSDLKQQPVEQAELGILDSQLVESIIDGDGHLAADEDDDDDEERGPRTCCERIEM 646
            |..:                                       .:||                  
  Rat   331 SYHV---------------------------------------REED------------------ 338

  Fly   647 YLDISLLQDPSFILMCLSVTLMSVGCPYMLYYLPAHVISIGYNKSEAGYLVAISAVLDLIGRLGL 711
                            |::.|:|                             |..::..:|:|.|
  Rat   339 ----------------LTIPLIS-----------------------------IFGIMTAVGKLLL 358

  Fly   712 GWLCDLQLFDRKKTYTLCILGAGCAVLTIPFAKTLVLVGLSAAVYGLCLGSWYVLMPVLLADVFG 776
            |.|.|.:..:....|...::..|.|:..||.||:.|.:.:.:.:.|...|:|.: .|.:.....|
  Rat   359 GILADFKWVNTLYLYVATLIITGLALCAIPLAKSYVTLAILSGILGFLTGNWSI-FPYVTTKTVG 422

  Fly   777 TDRISSSYGLVRMFQSIGAISVPPLAGLMRDLSGDYEICFYCMGSCMVLGTTPLIV-----WSIL 836
            .|:::.:||::..|..:|....||:.|...|.:..|:|.||..|.|::||...|::     |.:.
  Rat   423 IDKLAHAYGILMFFAGLGNSLGPPIVGWFYDWTQTYDIAFYFSGFCVLLGGFILLLAILPCWGMC 487

  Fly   837 EAR 839
            ..|
  Rat   488 NQR 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlnNP_610706.1 MFS 235..>411 CDD:119392 58/175 (33%)
MFS <656..827 CDD:119392 39/170 (23%)
MFS_1 658..>847 CDD:284993 43/187 (23%)
Slc16a9XP_038955085.1 MFS_MCT9 12..479 CDD:340986 141/635 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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