DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sln and slc16a7

DIOPT Version :9

Sequence 1:NP_610706.1 Gene:Sln / 36263 FlyBaseID:FBgn0033657 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_001032485.1 Gene:slc16a7 / 641419 ZFINID:ZDB-GENE-051113-248 Length:465 Species:Danio rerio


Alignment Length:637 Identity:137/637 - (21%)
Similarity:227/637 - (35%) Gaps:225/637 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 PPDGGYGWFIVFGAF-SVQFWVAGLVKSYGVLYVEIMETFPSSTATVASWIPAILSALCLVLAPL 288
            |||||:||.:|||:| |:.|..| ..||..:.:.||.|.|..|.:.:| |:.:|:.|......|:
Zfish    13 PPDGGWGWAVVFGSFISIGFSYA-FPKSLTIYFKEIQEYFSISYSQIA-WVSSIMLATMYAGGPV 75

  Fly   289 SSALCQRFSCRTVVFVGGIFCAMGMILSYFATSLLHLLLTFGVLTGIGGGLSTTPGIVIVSQYFD 353
            ||.|..|:..|.||..||:...:.|:.:.|.||:|||.|..||:.|.|......|.:.|:.:||.
Zfish    76 SSILVNRYGSRPVVIAGGLMVGVAMVTASFGTSILHLYLCVGVIGGFGLAFDLQPALTIIGKYFL 140

  Fly   354 KHRALANGICVSGTAAGSFILPVLIKHLA-------ENCGFHGTILILGGCMLHVCVSATLYRPI 411
            ..|.:||||.::|:       ||.:..||       :..|:.|:..||||.:.:.||:.:|.|||
Zfish   141 VKRPMANGIAMAGS-------PVFLSTLAPVNQFLFDQFGWRGSFFILGGVLFNCCVAGSLMRPI 198

  Fly   412 SAYTDQDSGQGQEETAKPLNEDINPSTTGILTTSTYLDTCDVGAGHELSDKFIEHLFLEESKNHL 476
            ..           ..:|...::|:|.|.|                                    
Zfish   199 KI-----------PVSKTTEDNISPQTAG------------------------------------ 216

  Fly   477 NYYASKQPAQDKSAQESDDEVKDIIGETTFIKPMKKVRSSGLLHSVEDLSTDSTWVYRKHSGTDS 541
                     ||.|                                             |.||   
Zfish   217 ---------QDDS---------------------------------------------KPSG--- 224

  Fly   542 NRGSRRRRNVFANDEVISKIQAHLEKPLSPPSVVSRGLSKSMEIPTPVSNLSDLKQQPVEQAELG 606
                                                                             
Zfish   225 ----------------------------------------------------------------- 224

  Fly   607 ILDSQLVESIIDGDGHLAADEDDDDDEERGPRTCCERIEMYLDISLLQDPSFILMCLSVTLMSVG 671
                                             |..::..::||||.:...|::..:...||..|
Zfish   225 ---------------------------------CSSKLNQFIDISLFKHRGFLIYLVGNVLMFFG 256

  Fly   672 CPYMLYYLPAHVISIGYNKSEAGYLVAISAVLDLIGRLGLGWLCDLQLFDRKKTY--TLCILGAG 734
            ....:.:|..:....|.::..|.:|::|.|::|:..|.|.|.:.:.:....|..|  :..:...|
Zfish   257 FFAPVVFLAPYAKHQGVDEYSAAFLLSIFALVDMFARPGTGLVANTKWIRPKIQYFFSFAVTYNG 321

  Fly   735 CAVLTIPFAKTLVLVGLSAAVYGLCLGSWYVLMPVLLADVFGTDRISSSYGLVRMFQSIGAISVP 799
            ...|..|.....:.:.:.|.::||..|....|:..:|.|:.|..|.||:.||..:.:....:..|
Zfish   322 LCHLMCPLLPGYIGLVVYAVLFGLAFGMVCALLFEVLMDLVGAQRFSSAVGLATIIECGPVLLGP 386

  Fly   800 PLAGLMRDLSGDYEICFYCMGSCMVLGTTPLIVWSILEARNHRLFVQREEEE 851
            |::||:.|:..||:..::..|..|:.|...|.   |:...|:| ::::||::
Zfish   387 PISGLLVDIFMDYKYMYFACGMMMLAGGVFLF---IMNYYNYR-WLKKEEKQ 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlnNP_610706.1 MFS 235..>411 CDD:119392 64/183 (35%)
MFS <656..827 CDD:119392 41/172 (24%)
MFS_1 658..>847 CDD:284993 46/190 (24%)
slc16a7NP_001032485.1 2A0113 1..440 CDD:273325 137/637 (22%)
MFS 20..420 CDD:119392 126/613 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578888
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.750

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