DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sln and zgc:114041

DIOPT Version :9

Sequence 1:NP_610706.1 Gene:Sln / 36263 FlyBaseID:FBgn0033657 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_001025143.1 Gene:zgc:114041 / 574425 ZFINID:ZDB-GENE-050706-122 Length:433 Species:Danio rerio


Alignment Length:637 Identity:125/637 - (19%)
Similarity:221/637 - (34%) Gaps:224/637 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   224 EPPDGGYGWFIVFGAFSVQFWVAGLVKSYGVLYVEIMETFPSSTATVASWIPAILSALCLVLAPL 288
            :||||||||.:|..||.:....|.::|::|:.::|:...:...|:| .|.:.:...|:..:.:||
Zfish     7 DPPDGGYGWVVVASAFFIMGLTAAVLKNFGLFFLELQNYYSVLTST-TSLMTSTTIAVFHLGSPL 70

  Fly   289 SSALCQRFSCRTVVFVGGIFCAMGMILSYFATSLLHLLLTFGVLTGIGGGLSTTPGIVIVSQYFD 353
            :|||....|.|.|:.|||:..|.|||::....||..:.|:.||:.|:|...:..|...:|:.||.
Zfish    71 ASALSMHLSQRPVIMVGGLLAASGMIIASLGLSLPWMYLSVGVIQGLGVSFTWVPANSMVNHYFK 135

  Fly   354 KHRALA-----NGICVSGTAAGSFILPVLIKHLAENCGFHGTILILGGCMLHVCVSATLYRPISA 413
            :.|.:|     :|.||.|.|...|     .:.|.|:..:.|.:|::||..|::.|...|.:|:  
Zfish   136 RWRPIACAISSSGECVFGMAFSPF-----FQWLIESYSWRGALLVIGGLQLNLIVCGALMKPL-- 193

  Fly   414 YTDQDSGQGQEETAKPLNEDINPSTTGILTTSTYLDTCDVGAGHELSDKFIEHLFLEESKNHLNY 478
                                                                             
Zfish   194 ----------------------------------------------------------------- 193

  Fly   479 YASKQPAQDKSAQESDDEVKDIIGETTFIKPMKKVRSSGLLHSVEDLSTDSTWVYRKHSGTDSNR 543
                                                                             
Zfish   194 ----------------------------------------------------------------- 193

  Fly   544 GSRRRRNVFANDEVISKIQAHLEKPLSPPSVVSRGLSKSMEIPTPVSNLSDLKQQPVEQAELGIL 608
                                                                  |||:.:...:|
Zfish   194 ------------------------------------------------------QPVQTSRKAVL 204

  Fly   609 DSQLVESIIDGDGHLAADEDDDDDEERGPRTCCERIEMYLDISLLQDPSFILMCLSVTLMSVGCP 673
            ||:      :|.|                    ...::....||:|.|..:|..:.....:.|..
Zfish   205 DSK------EGTG--------------------TSKKVTFQCSLIQRPELLLYIVFAIFAAAGFF 243

  Fly   674 YMLYYLPAHVISIGYNKSEAGYLVAISAVLDLIGRLGLGWLCDLQLFDRKKTYTLCILGAGCAVL 738
            ....:|..:|.::|.::..|..|:::.::.||:||||.|||.:|.|....:..|:.....|..:|
Zfish   244 IPPLFLVPYVNNLGMDQYWAASLLSVLSLADLLGRLGCGWLANLCLLRNLQLLTMVATAMGVVLL 308

  Fly   739 TIPFAKTLVLVGLSAAVYGLCLGSWYVLMPVLLADVFGTDRISSSYGLVRMFQSIGAISVPPLAG 803
            .:|.|.....|.:..::||...|....:....:.|:.|.:...|:.||..:.:|||....||.||
Zfish   309 LLPIAYGYWSVLVFTSLYGFLFGCVVAIHVTSIVDIVGLEGFDSALGLFMLLRSIGGFLGPPAAG 373

  Fly   804 LMRDLSGDYEICFYCMGSCMVL-GTTPLIVWSILEARNHRLFVQREEEECEE 854
            .:.|.:.::...||..|.|::| |...::|..::|.:..:...:..::.|.|
Zfish   374 WLVDWTHNFGAAFYLSGICLLLSGCFVVLVDWLVEKKKKKKLQETLQDPCTE 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlnNP_610706.1 MFS 235..>411 CDD:119392 54/180 (30%)
MFS <656..827 CDD:119392 46/171 (27%)
MFS_1 658..>847 CDD:284993 48/189 (25%)
zgc:114041NP_001025143.1 2A0111 15..396 CDD:273323 112/598 (19%)
MFS 18..403 CDD:119392 113/602 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578896
Domainoid 1 1.000 128 1.000 Domainoid score I5252
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.750

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