DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sln and Slc16a8

DIOPT Version :9

Sequence 1:NP_610706.1 Gene:Sln / 36263 FlyBaseID:FBgn0033657 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_065262.1 Gene:Slc16a8 / 57274 MGIID:1929519 Length:492 Species:Mus musculus


Alignment Length:619 Identity:135/619 - (21%)
Similarity:212/619 - (34%) Gaps:234/619 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 SGGP--NVEPPDGGYGWFIVFGAFSVQFWVAGLVKSYGVLYVEIMETFPSSTATVASWIPAILSA 280
            :|||  ...|||||:||.::...|.|..:..|..|:..|.:.|:...|.:..:..| |:.:|:.|
Mouse     3 AGGPRRGAGPPDGGWGWVVLGACFVVTGFAYGFPKAVSVFFRELKRDFGAGYSDTA-WVSSIMLA 66

  Fly   281 LCLVLAPLSSALCQRFSCRTVVFVGGIFCAMGMILSYFATSLLHLLLTFGVLTGIGGGLSTTPGI 345
            :.....||||.|..||.||.|:..||:..:.||||:.||:.|:.|.||.|||||:|..|:..|.:
Mouse    67 MLYGTGPLSSILVTRFGCRPVMLAGGLLASAGMILASFASRLVELYLTAGVLTGLGLALNFQPSL 131

  Fly   346 VIVSQYFDKHRALANGICVSGTAAGSFILPVLIKHLAENCGFHGTILILGGCMLHVCVSATLYRP 410
            :::..||::.|.||||:..:|:.....:|..|.:.|.|..|:.|..|:.||.:||.|....:.||
Mouse   132 IMLGLYFERRRPLANGLAAAGSPVFLSMLSPLGQLLGERFGWRGGFLLFGGLLLHCCACGAVMRP 196

  Fly   411 ISAYTDQDSGQGQEETAKPLNEDINPSTTGILTTSTYLDTCDVGAGHELSDKFIEHLFLEESKNH 475
                          ....|...|.:|                                       
Mouse   197 --------------PPGPPPRRDPSP--------------------------------------- 208

  Fly   476 LNYYASKQPAQDKSAQESDDEVKDIIGETTFIKPMKKVRSSGLLHSVEDLSTDSTWVYRKHSGTD 540
                                                                        |.|. 
Mouse   209 ------------------------------------------------------------HGGP- 212

  Fly   541 SNRGSRRRRNVFANDEVISKIQAHLEKPLSPPSVVSRGLSKSMEIPTPVSNLSDLKQQPVEQAEL 605
                :||||                                                        
Mouse   213 ----ARRRR-------------------------------------------------------- 217

  Fly   606 GILDSQLVESIIDGDGHLAADEDDDDDEERGPRTCCERIEMYLDISLLQDPSFILMCLSVTLMSV 670
                                                     .||:::..|.:|::..::..||::
Mouse   218 -----------------------------------------LLDVAVCTDRAFVVYVVTKFLMAL 241

  Fly   671 GCPYMLYYLPAHVISIGYNK------SEAGYLVAISAVLDLIGRLGLGWLCDLQLFDRKKTY--T 727
            |     .::|| ::.:.|.|      :||.:|::|...:|::.|...|.|..|........|  :
Mouse   242 G-----LFVPA-ILLVNYAKDAGVPDAEAAFLLSIVGFVDIVARPACGALAGLGRLRPHVPYLFS 300

  Fly   728 LCILGAGCAVLTIPFAKTLVLVGLSAAVYGLCLGSWYVL-MPVLLADVFGTDRISSSYGLVRMFQ 791
            |.:|..|...|....|::...:......:||..|....| ..||:|.| |..|..|:.|||.:.:
Mouse   301 LALLANGLTDLISARARSYGTLVAFCIAFGLSYGMVGALQFEVLMATV-GAPRFPSALGLVLLVE 364

  Fly   792 SIGAISVPPLAGLMRDLSGDYEICFYCMGSCMVL 825
            ::..:..||.||.:.|...:|||.||..||.:.|
Mouse   365 AVAVLIGPPSAGRLVDALKNYEIIFYLAGSEVAL 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlnNP_610706.1 MFS 235..>411 CDD:119392 62/175 (35%)
MFS <656..827 CDD:119392 50/179 (28%)
MFS_1 658..>847 CDD:284993 50/177 (28%)
Slc16a8NP_065262.1 2A0113 14..440 CDD:273325 130/608 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 419..492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167835653
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.840

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