DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sln and slc16a10

DIOPT Version :9

Sequence 1:NP_610706.1 Gene:Sln / 36263 FlyBaseID:FBgn0033657 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_001073497.1 Gene:slc16a10 / 566499 ZFINID:ZDB-GENE-040724-214 Length:505 Species:Danio rerio


Alignment Length:672 Identity:110/672 - (16%)
Similarity:202/672 - (30%) Gaps:256/672 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   206 VKDRDSSTTTTESGGP-NVEPPDGGYGWFIVFGAFSVQFWVAGLVKSYGVLYVEIMETFPS---- 265
            :|..:..|..:|...| ..|||:||:||.::..:......|.|:..::|:::|.::..|.|    
Zfish    44 LKQENGCTKASEQKSPEEFEPPEGGWGWVVMLASMWCNGSVFGIQNAFGIMFVYLLNEFGSEHDA 108

  Fly   266 ----STATVASWIPAILSALCLVLAPLSSALCQRFSCRTVVFVGGIFCAMGMILSYFATSLLHLL 326
                .||    |:.::...:....:|:.|.......||.....|.....:|::.|.|.|||..:.
Zfish   109 DLRFKTA----WVGSLSMGMIFFCSPIVSVFTDLLGCRITAVGGAAVGCVGLLASSFVTSLGPMY 169

  Fly   327 LTFGVLTGIGGGLSTTPGIVIVSQYFDKHRALANGICVSGTAAGSFILPVLIKHLAENCGFHGTI 391
            .|:|::...|...:..|.:||:..||.:...|.|||..:|::..:..||.::..|.::.|.:.|:
Zfish   170 FTYGIVFACGCSFAYQPSLVILGHYFKRRLGLVNGIVTAGSSVFTITLPYMLSGLLKSVGLYHTL 234

  Fly   392 LILGGCMLHVCVSATLYRPISAYTDQDSGQGQEETAKPLNEDINPSTTGILTTSTYLDTCDVGAG 456
            .:|...|..:.::...|:|:                                             
Zfish   235 RVLAIFMFILMLAGLTYKPL--------------------------------------------- 254

  Fly   457 HELSDKFIEHLFLEESKNHLNYYASKQPAQDKSAQESDDEVKDIIGETTFIKPMKKVRSSGLLHS 521
                                                                             
Zfish   255 ----------------------------------------------------------------- 254

  Fly   522 VEDLSTDSTWVYRKHSGTDSNRGSRRRRNVFANDEVISKIQAHLEKPLSPPSVVSRGLSKSMEIP 586
                                                                           :|
Zfish   255 ---------------------------------------------------------------LP 256

  Fly   587 TPVSNLSDLKQQPVEQAELGILDSQLVESIIDGDGHLAADEDDDDDEERGPRTCCERIEMYLDIS 651
            .|||:..                                           |.:.|..:....:::
Zfish   257 KPVSSSK-------------------------------------------PGSRCPPLSRIFNVN 278

  Fly   652 LLQDPSFILMCLSVTLMSVGCPYMLY-------YLPAHVISIGYNKSEAGYLVAISAVLDLIGRL 709
            :.:.       |...:.:.|.|..||       :|..||......::....|:|...:...:|||
Zfish   279 IWKS-------LGYRIWAFGIPAALYGYFVPYVHLMTHVEERFGPEANKEVLLACIGITSGVGRL 336

  Fly   710 GLGWLCDL-----QLFDRKKTYTLCILGAGCAVLTIPFAKTLVLVGLSAA--VYGLCLGSWYVLM 767
            ..|.:.|.     ::|.:..::.:    .|...:.||...  |..||.|.  :.||..|.:..:|
Zfish   337 IFGRVADYVPGVNKVFLQVSSFMV----IGVMSMMIPLCH--VFGGLIAVCLLMGLFDGCFICIM 395

  Fly   768 PVLLADVFGTDRISSSYGLVRMFQSIGAISVPPLAGLMRDLSGDYEICFYCMGSCMVLGTTPLIV 832
            ..:..::.|:..:|.:.|.:....||.....||:||.:||..|.|::.||..|...::|...|..
Zfish   396 APIAFELVGSQNVSQAIGFLLGMMSIPMTVGPPIAGFLRDRLGSYDVAFYLAGIPPLIGGAVLCA 460

  Fly   833 WSILEARNHRLFVQREEEECEE 854
            ...:|||..|.......|..|:
Zfish   461 IPWVEARRKRREAANTAENTEK 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlnNP_610706.1 MFS 235..>411 CDD:119392 41/183 (22%)
MFS <656..827 CDD:119392 43/184 (23%)
MFS_1 658..>847 CDD:284993 49/202 (24%)
slc16a10NP_001073497.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..64 4/19 (21%)
2A0113 56..458 CDD:273325 100/634 (16%)
MFS 71..462 CDD:119392 94/623 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 474..505 2/9 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578884
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.750

Return to query results.
Submit another query.