DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sln and slc16a6b

DIOPT Version :9

Sequence 1:NP_610706.1 Gene:Sln / 36263 FlyBaseID:FBgn0033657 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_001352167.1 Gene:slc16a6b / 561766 ZFINID:ZDB-GENE-110208-3 Length:527 Species:Danio rerio


Alignment Length:651 Identity:155/651 - (23%)
Similarity:243/651 - (37%) Gaps:184/651 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 PNV--EPPDGGYGWFIVFGAFSVQFWVAGLVKSYGVLYVEIMETFPSSTATVASWIPAILSALCL 283
            |||  |.||||:||.:....|.|:.:..|::|::|:...::|..|..:.:.| ||..:|...:..
Zfish    10 PNVYSEVPDGGWGWMVAAAFFFVEVFTYGIIKTFGIFLQDLMTEFHETNSRV-SWAVSICVFVMA 73

  Fly   284 VLAPLSSALCQRFSCRTVVFVGGIFCAMGMILSYFATSLLHLLLTFGVLTGIGGGLSTTPGIVIV 348
            ..||||:.|..||..|.||.|||...::|.|.:....|:..:.:|.|::.|:|..|:..|.:.|:
Zfish    74 FTAPLSTLLSNRFGHRPVVMVGGFLISLGTITTALTQSIDEMYITMGIVAGLGYCLTFLPTVTIL 138

  Fly   349 SQYFDKHRALANGICVSGTAAGSFILPVLIKHLAENCGFHGTILILGGCMLHVCVSATLYRPISA 413
            ||||.|.|:|...|..:|...........:..|.|..|:...::::|.....:.|...|.:||  
Zfish   139 SQYFSKRRSLVTSIASTGECFSMLAFAPAMNALKEQIGWRYCLMVIGVLQASIIVCGALLKPI-- 201

  Fly   414 YTDQDSGQGQEETAKPLNEDINPSTTGILTTSTYLDTCDVGAGHELSDKFIEHLFLEESKNHLNY 478
                        ..||     .|:|.                              |.|.:.|..
Zfish   202 ------------VIKP-----KPATQ------------------------------EASTSPLKV 219

  Fly   479 YASKQPAQDKSAQESDDEVKDIIGETTFIKPMKKVRSSGLLHSVEDLSTDSTWVYRKHSGTDSNR 543
            ..||..|:::....|.|.|                                      .||..|  
Zfish   220 LDSKYDAENEFTCTSFDSV--------------------------------------DSGVQS-- 244

  Fly   544 GSRRRRNVFANDEVISKIQAHLEKPLSPPSVVSRGLSKSMEIPTPVSNLSDLKQQPVEQAELGIL 608
                          ||..|.:|.|...         .|..|..:|        :.|::|      
Zfish   245 --------------ISSSQVNLAKEQQ---------KKEEEGESP--------ETPLKQ------ 272

  Fly   609 DSQLVESIIDGDGHLAADEDDDDDEERGPRTCCERIEMYLDISLLQDPSFILMCLSVTLMSVGCP 673
                              :.:|....|         ...||.|:|:|.||....|.....::|..
Zfish   273 ------------------KQEDSSVSR---------TKLLDFSVLRDASFNCYALFGLFATLGFF 310

  Fly   674 YMLYYLPAHVISIGYNKSEAGYLVAISAVLDLIGRLGLGWLCDLQLFDRK---KTYTLCILGAGC 735
            ....|:....:|.|.::..|.|:::..||.::.|||.:||     :.:||   |.|.|.|    |
Zfish   311 APQIYIIQLSVSRGVSQKSATYMLSAMAVAEIGGRLSMGW-----VLNRKPIRKIYILLI----C 366

  Fly   736 AVLTIPFAKTLVLV----GL--SAAVYGLCLG---SWYVLMPVLLA-DVFGTDRISSSYGLVRMF 790
            .||..|.......|    ||  .:.:||..||   |.::  |:|.. ||.|..|:||:.|:....
Zfish   367 TVLLCPVLVVFTFVSEFWGLMSCSCLYGFLLGTVASSHI--PMLAEDDVIGIQRMSSAVGVYVCI 429

  Fly   791 QSIGAISVPPLAGLMRDLSGDYEICFYCMGSCMV-LGTTPLIVWSILEARNHRLFVQREEEECEE 854
            ||...::.|||.|.:.|.:.:|...||   ||.. :|...|.:..:..|:....|.:|:.::.:.
Zfish   430 QSFAGLAGPPLGGFLVDQTNNYGSAFY---SCAAGMGVGALFLGLVRPAKTGLCFGKRKRKDQQS 491

  Fly   855 A 855
            |
Zfish   492 A 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlnNP_610706.1 MFS 235..>411 CDD:119392 49/175 (28%)
MFS <656..827 CDD:119392 55/184 (30%)
MFS_1 658..>847 CDD:284993 58/202 (29%)
slc16a6bNP_001352167.1 2A0111 17..512 CDD:331689 151/644 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578924
Domainoid 1 1.000 128 1.000 Domainoid score I5252
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.850

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