DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sln and slc16a3a

DIOPT Version :9

Sequence 1:NP_610706.1 Gene:Sln / 36263 FlyBaseID:FBgn0033657 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_001119873.1 Gene:slc16a3a / 561627 ZFINID:ZDB-GENE-061009-16 Length:501 Species:Danio rerio


Alignment Length:654 Identity:142/654 - (21%)
Similarity:225/654 - (34%) Gaps:245/654 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   217 ESGGPNVEPPDGGYGWFIVFGAFSVQFWVAGLVKSYGVLYVEIMETFP---SSTATVASWIPAIL 278
            :.||..|:.||||:||.::||.|.:..:.....|:..|.:.|::..|.   |.||    ||.:||
Zfish     7 DDGGCKVKAPDGGWGWAVLFGCFVITGFSYAFPKAVSVFFKELIREFGVGYSDTA----WISSIL 67

  Fly   279 SALCLVLAPLSSALCQRFSCRTVVFVGGIFCAMGMILSYFATSLLHLLLTFGVLTGIGGGLSTTP 343
            .|:.....||.|.|..||.||.|:.|||:|.::||||:.||||::|:.|..||:||:|..|:..|
Zfish    68 LAMLYGTGPLCSILVNRFGCRPVMLVGGLFASLGMILASFATSIIHIYLCTGVITGLGMALNFQP 132

  Fly   344 GIVIVSQYFDKHRALANGICVSGTAAGSFILPVLIKHLAENCGFHGTILILGGCMLHVCVSATLY 408
            .::::::||.:.|.||||:..:|:......|..|.:.|....|:.|..|||||.:|:.|....|.
Zfish   133 SLIMLNRYFSEKRPLANGLAAAGSPVALCCLSPLGQVLQYEYGWRGGFLILGGILLNCCACGALM 197

  Fly   409 RPISAYTDQDSGQGQEETAKPLNEDINPSTTGILTTSTYLDTCDVGAGHELSDKFIEHLFLEESK 473
            |                                                                
Zfish   198 R---------------------------------------------------------------- 198

  Fly   474 NHLNYYASKQPAQDKSAQESDDEVKDIIGETTFIKPMKKVRSSGLLHSVEDLSTDSTWVYRKHSG 538
                                                                             
Zfish   199 ----------------------------------------------------------------- 198

  Fly   539 TDSNRGSRRRRNVFANDEVISKIQAHLEKPLSPPSVVSRGLSKSMEIPTPVSNLSDLKQQPVEQA 603
                                         ||.||        ||.|.|            .:|.|
Zfish   199 -----------------------------PLVPP--------KSSEAP------------GIENA 214

  Fly   604 ELGILDSQLVESIIDGDGHLAADEDDDDDEERGPRTCCERIEMYLDISLLQDPSFILMCLSVTLM 668
                                    .||.|:...|:      ...||.|:.:|..|::..::.::|
Zfish   215 ------------------------PDDGDKTVKPK------PKLLDFSVFRDRGFLIYTIAASIM 249

  Fly   669 SVGCPYMLYYLPAHVIS----IGYNKSEAGYLVAISAVLDLIGRLGLGWLCDLQLFDRKKTY--T 727
            .:|    |:..|..|:|    :|...:::..|::|...:|:..|...|.:..||....:..|  :
Zfish   250 VLG----LFVPPVFVVSYAKELGNEDTKSALLLSILGFIDIFARPTCGIIAGLQWVRPRCVYLFS 310

  Fly   728 LCILGAGCAVLTIPFAKTLVLVGLSAAVYGLCLGSWYVLMPVLLADVFGTDRISSSYGLVRMFQS 792
            ..::..|...|....:|....:.:....:|:..|....|...:|..|.||::.||:.|||.|.::
Zfish   311 FALIFNGITDLVGSLSKDYTSLVVFCIFFGISYGMVGALQFEVLMAVVGTEKFSSAIGLVLMLEA 375

  Fly   793 IGAISVPPLAGLMRDLSGDYEICFYCMGSCMVLGTTPLIVWSIL--------------------E 837
            |..:..||.||.:.|.:..|...|...|..:||....|.:.:.|                    |
Zfish   376 IAVLVGPPSAGRLLDHTKKYMFVFLLAGIEVVLSALVLAICNFLCIKKKPEAPDAAAVESGEPVE 440

  Fly   838 ARNH 841
            .:||
Zfish   441 EKNH 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlnNP_610706.1 MFS 235..>411 CDD:119392 67/178 (38%)
MFS <656..827 CDD:119392 43/176 (24%)
MFS_1 658..>847 CDD:284993 48/210 (23%)
slc16a3aNP_001119873.1 2A0113 16..436 CDD:273325 136/635 (21%)
MFS 22..416 CDD:119392 130/609 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578936
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.850

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