DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sln and zgc:165507

DIOPT Version :9

Sequence 1:NP_610706.1 Gene:Sln / 36263 FlyBaseID:FBgn0033657 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_001092889.1 Gene:zgc:165507 / 561188 ZFINID:ZDB-GENE-070620-11 Length:394 Species:Danio rerio


Alignment Length:593 Identity:127/593 - (21%)
Similarity:209/593 - (35%) Gaps:219/593 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   219 GGPNVEPPDGGYGWFIVFGAF-SVQFWVAGLVKSYGVLYVEIMETFPSSTATVASWIPAILSALC 282
            |.|.|.|||||:||.:|.||| |:.|..| ..|:..|.:.:|...|.:|.:.|| ||.:|:.|:.
Zfish     6 GPPAVPPPDGGWGWAVVGGAFISIGFSYA-FPKATTVFFKDIQRIFNASYSQVA-WISSIMLAVM 68

  Fly   283 LVLAPLSSALCQRFSCRTVVFVGGIFCAMGMILSYFATSLLHLLLTFGVLTGIGGGLSTTPGIVI 347
            ....|:||.|...:.||.::.:||..||:|||.:.|..::|.|.:..||:.|:|...:..|.:.:
Zfish    69 YAGGPISSILVNTYGCRPIMILGGFLCAIGMISASFCNNVLELYICIGVIGGLGLAFNLQPALTM 133

  Fly   348 VSQYFDKHRALANGICVSGTAAGSFILPVLIKHLAENCGFHGTILILGGCMLHVCVSATLYRPIS 412
            :.:||.|.|.:|||..::|:......|..|.::|....|:.|:.|||||.:|:.||:.:|.||:.
Zfish   134 IGRYFYKKRPIANGFAMAGSPVFLSTLAPLNQYLINEYGWRGSFLILGGLLLNCCVAGSLMRPLV 198

  Fly   413 AYTDQDSGQGQEETAKPLNEDINPSTTGILTTSTYLDTCDVGAGHELSDKFIEHLFLEESKNHLN 477
            |                                                                
Zfish   199 A---------------------------------------------------------------- 199

  Fly   478 YYASKQPAQDKSAQESDDEVKDIIGETTFIKPMKKVRSSGLLHSVEDLSTDSTWVYRKHSGTDSN 542
                  ||                                                         
Zfish   200 ------PA--------------------------------------------------------- 201

  Fly   543 RGSRRRRNVFANDEVISKIQAHLEKPLSPPSVVSRGLSKSMEIPTPVSNLSDLKQQPVEQAELGI 607
             ||                       ::||.||.                       |:.|    
Zfish   202 -GS-----------------------IAPPPVVE-----------------------VKHA---- 215

  Fly   608 LDSQLVESIIDGDGHLAADEDDDDDEERGPRTCCERIEMYLDISLLQDPSFILMCLSVTLMSVGC 672
                                      |:...|..:.:..|||:||.:...|::......:|.:|.
Zfish   216 --------------------------EKEKLTAWQTVNKYLDLSLFKHRGFLIYLSGNVIMFLGF 254

  Fly   673 PYMLYYLPAHVISIGYNKSEAGYLVAISAVLDLIGRLGLGWLCD-------LQLFDRKKTYTLCI 730
            ...:.:|..:....|.::.:|.:|::|.|.:|:..|..:|.|.:       :|.|     ::..:
Zfish   255 FAPIVFLSPYAKDNGVDEYQAAFLLSILAFVDMFARPSMGLLANSRWVRPRIQYF-----FSFAV 314

  Fly   731 LGAGCAVLTIPFAKTLVLVGLSAAVYGLCLGSWYVLMPVLLADVFGTDRISSSYGLVRMFQSIGA 795
            |..|...|..|.|::...:.:.|..:|...|....::...|.|:.|..|.||:.||..:.:....
Zfish   315 LYNGVCHLLCPLAESYTGMVVYAVFFGFAFGMVSAVLFETLMDLVGAQRFSSAVGLTTIVECCPV 379

  Fly   796 ISVPPLAG 803
            :..|||||
Zfish   380 LIGPPLAG 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlnNP_610706.1 MFS 235..>411 CDD:119392 62/176 (35%)
MFS <656..827 CDD:119392 36/155 (23%)
MFS_1 658..>847 CDD:284993 36/153 (24%)
zgc:165507NP_001092889.1 MFS 38..387 CDD:119392 107/558 (19%)
MFS_1 46..383 CDD:284993 103/546 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578772
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D518644at33208
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.940

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