DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sln and slc16a1

DIOPT Version :9

Sequence 1:NP_610706.1 Gene:Sln / 36263 FlyBaseID:FBgn0033657 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_001015931.1 Gene:slc16a1 / 548685 XenbaseID:XB-GENE-1014566 Length:490 Species:Xenopus tropicalis


Alignment Length:644 Identity:139/644 - (21%)
Similarity:235/644 - (36%) Gaps:199/644 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   219 GGP-NVEPPDGGYGWFIVFGAF-SVQFWVAGLVKSYGVLYVEIMETFPSSTATVASWIPAILSAL 281
            ||| ...||:||:||.:|..|| |:.|..| ..||..|.:.:|...| .:|::..|||.:|:.|:
 Frog     6 GGPVGYTPPEGGWGWVVVVAAFVSIGFSYA-FPKSITVFFKDIEAIF-GATSSEVSWISSIMLAV 68

  Fly   282 CLVLAPLSSALCQRFSCRTVVFVGGIFCAMGMILSYFATSLLHLLLTFGVLTGIGGGLSTTPGIV 346
            .....|:||.|..::..|.|:..||.....|:|.:.|..::..|.|..||:.|.|...:..|.:.
 Frog    69 MYAGGPISSVLVNKYGSRPVMIAGGCLAGTGLIAASFCNTVAELYLCIGVVGGFGLAFNLNPALT 133

  Fly   347 IVSQYFDKHRALANGICVSGTAAGSFILPVLIKHLAENCGFHGTILILGGCMLHVCVSATLYRPI 411
            ::.:||.|.|.:|||:.::|:......|..|.::.....|:.|:.|||||.:.:.||:.:|.|||
 Frog   134 MIGKYFFKKRPIANGLAMAGSPVFLSTLAPLNQYFYSIFGWRGSFLILGGLLFNCCVAGSLMRPI 198

  Fly   412 SAYTDQDSGQGQEETAKPLNEDINPSTTGILTTSTYLDTCDVGAGHELSDKFIEHLFLEESKNHL 476
                    |...|:|.|.:.:::                                  |||:...:
 Frog   199 --------GPKPEDTKKKVTKEV----------------------------------LEEAGKCV 221

  Fly   477 NYYASKQPAQDKSAQESDDEVKDIIGETTFIKPMKKVRSSGLLHSVEDLSTDSTWVYRKHSGTDS 541
                         ::|..|..||:|......||                                
 Frog   222 -------------SKEDGDAHKDLIEGKAKTKP-------------------------------- 241

  Fly   542 NRGSRRRRNVFANDEVISKIQAHLEKPLSPPSVVSRGLSKSMEIPTPVSNLSDLKQQPVEQAELG 606
                                                                             
 Frog   242 ----------------------------------------------------------------- 241

  Fly   607 ILDSQLVESIIDGDGHLAADEDDDDDEERGPRTCCERIEMYLDISLLQDPSFILMCLSVTLMSVG 671
                                            |..:.|..:||:||.....|:|......:|..|
 Frog   242 --------------------------------TLFQTINKFLDLSLFTHRGFLLYLSGHMIMFFG 274

  Fly   672 CPYMLYYLPAHVISIGYNKSEAGYLVAISAVLDLIGRLGLGWLCDLQLFDRKKTY--TLCILGAG 734
            ....|.:|..:..|...:...|.:|::|.|::|:|.|..:|.:.:.:....|..|  .:.:|..|
 Frog   275 LFAPLVFLSNYAKSKNISPESAAFLLSILAIVDMIARPSMGIVANTKWVRPKIQYFFAVAVLYNG 339

  Fly   735 CAVLTIPFAKTLVLVGLSAAVYGLCLGSWYVLMPVL---LADVFGTDRISSSYGLVRMFQSIGAI 796
            ...|.:|.:.:.|...:.|..:|...| |  |..||   |.|:.|..|.||:.|||.:.:....:
 Frog   340 ICHLLVPLSTSYVGFCIYAGFFGFAFG-W--LSSVLFETLMDLVGAQRFSSAVGLVTIVECCPVL 401

  Fly   797 SVPPLAGLMRDLSGDYEICFYCMGSCMVLGTTPLIVWSILEARNHRLFVQREEEECEEA 855
            ..|||.|.:.|:.|||:..:...|..:::.:..|.:...:   ::||..:.::.|.::|
 Frog   402 LGPPLLGRLNDIYGDYKYTYQACGIVLIVASVYLFIGMTI---HYRLLAKEQKAEQKKA 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlnNP_610706.1 MFS 235..>411 CDD:119392 56/176 (32%)
MFS <656..827 CDD:119392 47/175 (27%)
MFS_1 658..>847 CDD:284993 50/193 (26%)
slc16a1NP_001015931.1 2A0113 6..471 CDD:273325 139/644 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D518644at33208
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - otm48502
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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