DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sln and slc16a12b

DIOPT Version :9

Sequence 1:NP_610706.1 Gene:Sln / 36263 FlyBaseID:FBgn0033657 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_001139286.1 Gene:slc16a12b / 449947 ZFINID:ZDB-GENE-050522-80 Length:488 Species:Danio rerio


Alignment Length:652 Identity:159/652 - (24%)
Similarity:252/652 - (38%) Gaps:206/652 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   204 QVVKDRDSSTTTTESGGPNVEPPDGGYGWFIVFGAFSVQFWVAGLVKSYGVLYVEIMETFPSSTA 268
            :||...|......:.||  |.|||||:||.||.|.|.|......:.:...:.:||....|....:
Zfish     4 KVVGRTDYMAQEKKKGG--VLPPDGGWGWMIVAGCFVVTVCTRAVTRCISIFFVEFQMHFAKDYS 66

  Fly   269 TVASWIPAILSALCLVLAPLSSALCQRFSCRTVVFVGGIFCAMGMILSYFATSLLHLLLTFGVLT 333
            ..| ||.:::....::.|||.|.:..:.|||..|.:||...::|::||.|||||.:|..|.|:||
Zfish    67 GTA-WIHSLVDCTTMLCAPLGSLIGNQLSCRIAVILGGFLASVGLVLSSFATSLEYLYATLGLLT 130

  Fly   334 GIGGGLSTTPGIVIVSQYFDKHRALANGICVSGTAAGSFILPVLIKHLAENCGFHGTILILGGCM 398
            |:|..|..||.|.:|..||.:.:|||.||.:||:..|:|||..:::.|.|:..:.|.:|||||.:
Zfish   131 GLGFALCYTPAIAMVGIYFCERKALAYGIAMSGSGIGTFILAPVVQLLIEHYSWRGALLILGGFV 195

  Fly   399 LHVCVSATLYRPISAYTDQDSGQGQEETAKPLNEDINPSTTGILTTSTYLDTCDVGAGHELSDKF 463
            |::||...|.|||..         :||.|.||..|   |..|                       
Zfish   196 LNLCVCGALLRPIIL---------KEEEACPLPVD---SECG----------------------- 225

  Fly   464 IEHLFLEESKNHLNYYASKQPAQDKSAQESDDEVKDIIGETTFIKPMKKVRSSGLLHSVEDLSTD 528
                           |:.|.|.                                           
Zfish   226 ---------------YSVKPPT------------------------------------------- 232

  Fly   529 STWVYRKHSGTDSNRGSRRRRNVFANDEVISKIQAHLEKPLSPPSVVSRGLSKSMEIPTPVSNLS 593
                        .|.|..|                                          |..|
Zfish   233 ------------LNGGPTR------------------------------------------SAAS 243

  Fly   594 DLKQQPVEQAELGILDSQLVESIIDGDGHLAADEDDDDDEERGPRTCCERIEMYLDISLLQDPSF 658
            |.||:                                         |.:.::.|   ..|..|.|
Zfish   244 DAKQR-----------------------------------------CFQSMQEY---HFLLMPDF 264

  Fly   659 ILMCLSVTLMSVGCPYMLYYLPAHVISIGYNKSEAGYLVAISAVLDLIGRLGLGWLCDLQLFDRK 723
            :::..|..|::.||.....||..:.:.:|.....|.:|::|..|:|::|.:..|||.|.:..  |
Zfish   265 LVLAGSFLLLASGCSLPFVYLVPYALDVGVGHQHAAFLMSILGVIDIVGNITFGWLTDRRCL--K 327

  Fly   724 KTYTLCILGA----GCAVLTIPFAKTLVLVGLSAAVYGLCLGSWYVLMPVLLADVFGTDRISSSY 784
            |...:|.:.|    |...|.||..:|.|.:...:.:||...|::..|:||:.:||.|...:||:.
Zfish   328 KYRNICYMFAVGMEGLCCLFIPLLRTFVWLVPFSVLYGYFDGAYVALIPVVTSDVVGRQYLSSAL 392

  Fly   785 GLVRMFQSIGAISVPPLAGLMRDLSGDYEICFYCMGSCMVLGTTPLIVWSILEARNHRLFVQREE 849
            |:|....::..:..||:.|.:.|.:|.|...|:..|..::  ::.|:::|:...|    :.||.:
Zfish   393 GVVYFLHAVPYLVSPPIGGWLVDTTGTYTATFFLSGFALI--SSSLLLFSVAIIR----YCQRNQ 451

  Fly   850 EE 851
            ::
Zfish   452 KK 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlnNP_610706.1 MFS 235..>411 CDD:119392 66/175 (38%)
MFS <656..827 CDD:119392 50/174 (29%)
MFS_1 658..>847 CDD:284993 52/192 (27%)
slc16a12bNP_001139286.1 MFS 33..430 CDD:119392 140/590 (24%)
MFS_1 37..407 CDD:284993 130/563 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578928
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D518644at33208
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.850

Return to query results.
Submit another query.