DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sln and slc16a12

DIOPT Version :9

Sequence 1:NP_610706.1 Gene:Sln / 36263 FlyBaseID:FBgn0033657 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_989310.1 Gene:slc16a12 / 394932 XenbaseID:XB-GENE-1012784 Length:473 Species:Xenopus tropicalis


Alignment Length:627 Identity:152/627 - (24%)
Similarity:240/627 - (38%) Gaps:198/627 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   215 TTESGGPNVEPPDGGYGWFIVFGAFSVQFWVAGLVKSYGVLYVEIMETFPSSTATVASWIPAILS 279
            |.|....:..|||||:||.||.|.|.|......:.:...:.:||....|....|..| ||.:|:.
 Frog     2 TQEKRNLHKAPPDGGWGWMIVIGCFFVTVCTRAVTRCISIFFVEFQSYFAQDYARTA-WIHSIVD 65

  Fly   280 ALCLVLAPLSSALCQRFSCRTVVFVGGIFCAMGMILSYFATSLLHLLLTFGVLTGIGGGLSTTPG 344
            ...::.||:.|.:...|||:..:.:||:..:.|::||.|||||.:|.||.|||||:|..|..:|.
 Frog    66 CSTMLCAPIGSYVSNHFSCQVGIILGGVLASTGLVLSSFATSLEYLYLTLGVLTGLGFALCYSPA 130

  Fly   345 IVIVSQYFDKHRALANGICVSGTAAGSFILPVLIKHLAENCGFHGTILILGGCMLHVCVSATLYR 409
            |.:|.:||:|.:|||.||.:||:..|:|||..:::.|.|...:.|.:|||||.:.::||...|.|
 Frog   131 IAMVGKYFEKRKALAYGIAMSGSGIGTFILAPVVQLLIEQFSWRGALLILGGFVSNLCVCGALMR 195

  Fly   410 PISAYTDQDSGQGQEETAKPLNEDINPSTTGILTTSTYLDTCDVGAGHELSDKFIEHLFLEESKN 474
            ||:                 |.||                                         
 Frog   196 PIT-----------------LKED----------------------------------------- 202

  Fly   475 HLNYYASKQPAQDKSAQESDDEVKDIIGETTFIKPMKKVRSSGLLHSVEDLSTDSTWVYRKHSGT 539
            .|:|                              |:|:                           
 Frog   203 SLHY------------------------------PLKQ--------------------------- 210

  Fly   540 DSNRGSRRRRNVFANDEVISKIQAHLEKPLSPPSVVSRGLSKSMEIPTPVSNLSDLKQQPVEQAE 604
                                                                    :|...|..:
 Frog   211 --------------------------------------------------------EQMENEPTQ 219

  Fly   605 LGILDSQLVESIIDGDGHLAADEDDDDDEERGPRTC-CERIEMYLDISLLQDPSFILMCLSVTLM 668
            .|.|||. ...:.....|              .|.| |.:.|    .|.|..|.|:::.:|...:
 Frog   220 SGRLDSS-CSPLCQDCSH--------------KRLCYCTKKE----YSFLLKPKFMVLAVSFLFL 265

  Fly   669 SVGCPYMLYYLPAHVISIGYNKSEAGYLVAISAVLDLIGRLGLGWLCDLQLFDRKKTYTLCILGA 733
            :.||.....||..:.:::|.:..||.:|::|..::|::|.:..||:.|.: |.:|..| .|.|.|
 Frog   266 AYGCSPPFVYLVPYALNVGVSNQEAAFLMSILGIIDIVGNITFGWVTDTR-FLKKHRY-CCYLIA 328

  Fly   734 ----GCAVLTIPFAKTLVLVGLSAAVYGLCLGSWYVLMPVLLADVFGTDRISSSYGLVRMFQSIG 794
                |...|.:|......|:...:.::|...|::..|:||:..||.||..:||:.|:|....::.
 Frog   329 VGLDGLCCLFLPILTRFQLLVPFSVMFGYFDGAYVALIPVVTGDVVGTSSLSSALGVVFFLHAVP 393

  Fly   795 AISVPPLAGLMRDLSGDYEICFYCMGSCMVLGTTPLIVWSIL 836
            .:..||:||.:.|.:|||...|...|..|:.....|.:..|:
 Frog   394 YLVSPPIAGWLVDTTGDYTAAFLLSGFSMIFCAVLLALAKII 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlnNP_610706.1 MFS 235..>411 CDD:119392 67/175 (38%)
MFS <656..827 CDD:119392 51/174 (29%)
MFS_1 658..>847 CDD:284993 52/183 (28%)
slc16a12NP_989310.1 2A0111 12..444 CDD:331689 150/617 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D518644at33208
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - otm48502
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
77.020

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