DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sln and CG13907

DIOPT Version :9

Sequence 1:NP_610706.1 Gene:Sln / 36263 FlyBaseID:FBgn0033657 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_001286894.1 Gene:CG13907 / 38104 FlyBaseID:FBgn0035173 Length:816 Species:Drosophila melanogaster


Alignment Length:832 Identity:194/832 - (23%)
Similarity:327/832 - (39%) Gaps:200/832 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 SSRKSGSGSGSGLNTARSRCVRRAKE----RERDRVTVARRSKQVVKDRDSSTTTTESG------ 219
            :|...|...|:..::||.|...|...    .|..|:|    ::|..:|.|:.....:..      
  Fly     5 NSSNPGIVGGNSASSARLRRFERTDSELACEEAARLT----AEQSPEDEDNQDNDEDDDDEESVY 65

  Fly   220 GPNVEPPDGGYGWFIVFGAFSVQFWVAGLVKSYGVLYVEIMETFPSSTATVASWIPAILSALCLV 284
            |....||||||||.|.|.:|.....|.|:..::|:...|.:..|.....||| |:.::||.:.|.
  Fly    66 GELPPPPDGGYGWVICFASFMCNMIVDGIAYTFGIFLEEFVAYFHEGKGTVA-WVGSLLSGVYLS 129

  Fly   285 LAPLSSALCQRFSCRTVVFVGGIFCAMGMILSYFATSLLHLLLTFGVLTGIGGGLSTTPGIVIVS 349
            ..|:.|||..::.||.|...|.|...:..:||.|:|::..|:.|:|.:.|.|.|:...|.:|.|.
  Fly   130 AGPIVSALANKYGCRAVCIAGSIIACIAFVLSTFSTNVSMLMATYGFMGGFGFGMIYLPAVVAVG 194

  Fly   350 QYFDKHRALANGICVSGTAAGSFILPVLIKHLAENCGFHGTILILGGCMLHVCVSATLYRPIS-- 412
            .||:..|:||.||.|.|:..|:|....|..:|.|..|:...:||..|.:|:..:...:.||::  
  Fly   195 YYFETKRSLATGIAVCGSGFGTFAFAPLATYLLEEYGWKNALLIFAGLILNCAIFGAMMRPLTYP 259

  Fly   413 -----------AYTDQD------------------SGQGQEETAKPLNED--------------- 433
                       .|.::.                  .|..:.:...|||.|               
  Fly   260 KKKKQKPLMQRMYEEKQLQLERGSFAGSHFMVQLPDGTIERKLKMPLNADPGVHSSLNLELLAQQ 324

  Fly   434 -----INP-STTGILTTSTYLD-------------------TCDVGAG------HELSDKFIEHL 467
                 ::| ||...:|.|..:|                   :....||      |..|:.     
  Fly   325 AGGGGLHPVSTLPTITESKVVDVHRQNGAQSPPNGDSNGQLSARSAAGAVGRRPHRNSES----- 384

  Fly   468 FLEESKNH----LNYYASKQPA----------QDKSAQESDDEVKDIIGETTFIKPMKKVR--SS 516
              |.|..|    :...|| |||          ::.|....:..|:.......|...:..:|  |.
  Fly   385 --ENSPYHSQDAMTRNAS-QPAFLAGDHQSLPKNGSVPAFNTRVRKTSASERFQPSLAAIRATSR 446

  Fly   517 GLLHSVE--DLSTDSTWVYRKHSGTDSNRGSR-----RRRNVFANDEVISKIQAHLEKPLS--PP 572
            |.|.:..  |.::....:.::..|:.:....|     .|:::|.:..|.:..|...:|.|:  ..
  Fly   447 GDLEAGAGGDFASSKLSLSQRQGGSQTGSSGRMVRPMSRKDIFYSGSVTNLPQYQSQKSLANYRN 511

  Fly   573 SVVS-RGLSKSMEIPTPVSNLSDLKQQPVEQAE-----------LGILDSQLVESIIDGDGHLAA 625
            ||:| ....|||:        |..|..|:.:||           |||.||  |:|:::       
  Fly   512 SVLSLTKYEKSMQ--------SVAKLDPLAEAEKHREEYDLCPCLGIPDS--VKSVVN------- 559

  Fly   626 DEDDDDDEERGPRTCCERIEMYLDISLLQDPSFILMCLSVTLMSVGCPYMLYYLPAHVISIGYNK 690
                                ..||:|||:||.|:|:.:|......|......||..........|
  Fly   560 --------------------TMLDVSLLKDPVFMLIGVSNIFGMAGLYVPFVYLVDAAKEHDIPK 604

  Fly   691 SEAGYLVAISAVLDLIGRLGLGWLCDLQLFDRKKTYTLCILGAGCAVLTIPFAKTLVLVGLSAAV 755
            ::|..|::|..:.:.:||:..||:.||...:.......|:|.:..||...|...:.......:..
  Fly   605 NDAAMLLSIIGITNTVGRVFCGWVADLPQVNSLLLNNCCLLVSTIAVTLTPLCYSYAAYITMSIF 669

  Fly   756 YGLCLGSWYVLMPVLLADVFGTDRISSSYGLVRMFQSIGAISVPPLAGLMRDLSGDYEICFY--- 817
            :||.:..:..|..::|.|:.|.|::::::||:.:|:...|:...||||.:.|::..|::.||   
  Fly   670 FGLAISGYISLTSIILVDLLGLDKLTNAFGLLILFRGFAALIGTPLAGAIYDMTHTYDLPFYMAG 734

  Fly   818 --------------CMGSCMVLGTTPLIVWSILEARNHRLFVQREEEECEEA 855
                          |:..|.....||:.|.::...         :||:.|:|
  Fly   735 ALFGISTITSFLAPCLKRCSPSEETPVHVETLTPI---------DEEQGEDA 777

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlnNP_610706.1 MFS 235..>411 CDD:119392 56/175 (32%)
MFS <656..827 CDD:119392 43/187 (23%)
MFS_1 658..>847 CDD:284993 45/205 (22%)
CG13907NP_001286894.1 MFS 78..>258 CDD:119392 59/180 (33%)
MFS <570..748 CDD:119392 41/177 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446244
Domainoid 1 1.000 45 1.000 Domainoid score I4618
eggNOG 1 0.900 - - E1_KOG2504
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 117 1.000 Inparanoid score I274
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - otm48502
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
109.900

Return to query results.
Submit another query.