DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sln and slc16a1b

DIOPT Version :9

Sequence 1:NP_610706.1 Gene:Sln / 36263 FlyBaseID:FBgn0033657 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_956379.1 Gene:slc16a1b / 368274 ZFINID:ZDB-GENE-030515-5 Length:461 Species:Danio rerio


Alignment Length:649 Identity:143/649 - (22%)
Similarity:228/649 - (35%) Gaps:232/649 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 SGGP-NVEPPDGGYGWFIVFGAF-SVQFWVAGLVKSYGVLYVEIMETFPSSTATVASWIPAILSA 280
            :||| ...||:||:||.:|.||| |:.|..| ..||..|.:.|| |...::|::..|||.:|:.|
Zfish     5 TGGPVGYTPPEGGWGWAVVVGAFISIGFSYA-FPKSITVFFKEI-EVIFNATSSQVSWISSIMLA 67

  Fly   281 LCLVLAPLSSALCQRFSCRTVVFVGGIFCAMGMILSYFATSLLHLLLTFGVLTGIGGGLSTTPGI 345
            :.....|:||.|..:|..|.::..||.....|::.:.|..::..|....||:.|:|...:..|.:
Zfish    68 VMYAGGPISSILVNKFGSRPIMIAGGCLSGTGLVAASFCDTVEGLYFCVGVIGGLGLAFNLNPAL 132

  Fly   346 VIVSQYFDKHRALANGICVSGTAAGSFILPVLIKHLAENCGFHGTILILGGCMLHVCVSATLYRP 410
            .::.:||.|.|.:||||.::|:......|..|...|.:..|:.|:.|||||.:|:.||:.:|.||
Zfish   133 TMIGKYFYKRRPIANGIAMAGSPVFLSTLAPLNSWLFDQFGWRGSFLILGGALLNCCVAGSLMRP 197

  Fly   411 ISAYTDQDSGQGQEETAKPLNEDINPSTTGILTTSTYLDTCDVGAGHELSDKFIEHLFLEESKNH 475
            |.              .||                                              
Zfish   198 IG--------------PKP---------------------------------------------- 202

  Fly   476 LNYYASKQPAQDKSAQESDDEVKDIIGETTFIKPMKKVRSSGLLHSVEDLSTDSTWVYRKHSGTD 540
                   |||..|...|              |||.:|                            
Zfish   203 -------QPAIPKEDAE--------------IKPQEK---------------------------- 218

  Fly   541 SNRGSRRRRNVFANDEVISKIQAHLEKPLSPPSVVSRGLSKSMEIPTPVSNLSDLKQQPVEQAEL 605
                                                                             
Zfish   219 ----------------------------------------------------------------- 218

  Fly   606 GILDSQLVESIIDGDGHLAADEDDDDDEERGPRTCCERIEMYLDISLLQDPSFILMCLSVTLMSV 670
                                            :|..:.|..:||::|.....|:|..|...:|..
Zfish   219 --------------------------------KTVMQTINGFLDLTLFTHRGFLLYLLGNVIMFF 251

  Fly   671 GCPYMLYYLPAHVISIGYNKSEAGYLVAISAVLDLIGRLGLGWLCD-------LQLFDRKKTYTL 728
            |....|.:|..:..|...:|.:|.:|::|.|..|:|.|..:|.:.:       :|.|     :..
Zfish   252 GLFAPLVFLSNYAKSKHISKDKAAFLLSILAFTDMIARPSMGLVANTRWVRPRIQYF-----FAA 311

  Fly   729 CILGAGCAVLTIPFAKTLVLVGLSAAVYGLCLGSWYVLMPVL---LADVFGTDRISSSYGLVRMF 790
            .:|..|...|..|.:...:...:.|..:|:..| |  |..||   |.|:.|..|.||:.|||.:.
Zfish   312 SVLYNGVCHLLAPLSTDYLGFAIYAVFFGVAFG-W--LSSVLFETLMDLVGAQRFSSAVGLVTIV 373

  Fly   791 QSIGAISVPPLAGLMRDLSGDYEICFYCMGSCMVLGTTPLIVWSILEARNHRLFVQREEEECEE 854
            :....:..|||.|.:.|:..||:..:...|..:|:.:..|.|...:   |:|| |.:|::|.|:
Zfish   374 ECAPVLLGPPLLGRLNDIYDDYKYTYQGCGIVLVIASIFLFVGMGI---NYRL-VDKEKKEEEK 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlnNP_610706.1 MFS 235..>411 CDD:119392 59/176 (34%)
MFS <656..827 CDD:119392 48/180 (27%)
MFS_1 658..>847 CDD:284993 54/198 (27%)
slc16a1bNP_956379.1 2A0113 1..442 CDD:273325 143/649 (22%)
MFS 20..415 CDD:119392 127/610 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578880
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D518644at33208
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.750

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