DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sln and CG8389

DIOPT Version :9

Sequence 1:NP_610706.1 Gene:Sln / 36263 FlyBaseID:FBgn0033657 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_611076.2 Gene:CG8389 / 36764 FlyBaseID:FBgn0034063 Length:471 Species:Drosophila melanogaster


Alignment Length:623 Identity:111/623 - (17%)
Similarity:207/623 - (33%) Gaps:192/623 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 PDGGYGWFIVFGAFSVQFWVAGLVKSYGVLYVEIMETFPSSTATVASWIPAILSALCLVLAPL-S 289
            |||||||.:|.....:......::..:|.|:|..::.....|.|.|  :...|::|.|..:.| .
  Fly    10 PDGGYGWIVVAAVALINMTNQSILSVFGQLFVGELQKMQEDTFTAA--LITNLNSLALNFSGLFI 72

  Fly   290 SALCQRFSCRTVVFVGGIFCAMGMILSYFATSLLHLLLTFGVLTGIGGGLSTTPGIVIVSQYFDK 354
            ....:.|..|.|...|.|..|:|:.|..||:...|.:|.:....|.|.||.:....:.::.||..
  Fly    73 GPAIKSFKPRNVAATGCILVALGLALCAFASESWHFILGYSFFVGFGLGLISPSTFMAINSYFTT 137

  Fly   355 HRALANGICVSGTAAGSFILPVLIKHLAENCGFHGTILILGGCMLHVCVSATLYRPISAYTDQDS 419
            .|..|.|:.::|...|..::|.|:::|.:|.||...:|.:....|.....|...:|         
  Fly   138 KRGRAVGVSLAGAGLGQVLIPHLVRYLLDNHGFRYAVLSMSSLSLFGLFGAAFLKP--------- 193

  Fly   420 GQGQEETAKPLNEDINPSTTGILTTSTYLDTCDVGAGHELSDKFIEHLFLEESKNHLNYYASKQP 484
                          :||.                 |.|             .::.|:        
  Fly   194 --------------LNPP-----------------AKH-------------NNRKHI-------- 206

  Fly   485 AQDKSAQESDDEVKDIIGETTFIKPMKKVRSSGLLHSVEDLSTDSTWVYRKHSGTDSNRGSRRRR 549
               :...|:|       ||.|  .|::.|                                    
  Fly   207 ---RLLTEAD-------GEKT--SPLQVV------------------------------------ 223

  Fly   550 NVFANDEVISKIQAHLEKPLSPPSVVSRGLSKSMEIPTPVSNLSDLKQQPVEQAELGILDSQLVE 614
                   ::...|:.:|:  |||:|                                        
  Fly   224 -------IVPTNQSKIER--SPPNV---------------------------------------- 239

  Fly   615 SIIDGDGHLAADEDDDDDEERGPRTCC----ERIEMYLDISLLQDPSFILMCLSVTLMSVGCPYM 675
                                   .|.|    :|:...:|:.||:|..|..:.:.:.|:.......
  Fly   240 -----------------------DTLCSRMGQRLVQAMDLELLKDLVFWSIIVGMALVYTATINF 281

  Fly   676 LYYLPAHV-ISIGYNKSEAGYLVAISAVLDLIGRLGLGWLCDLQLFDRKKTYTLCILGAGCAVLT 739
            ....|..: .:...|.....:.:::.|..|::.||.|..:.|......:..:.:.|:|...|...
  Fly   282 TMIFPGFLGQTAQLNSQMVAFCMSLVAGADIVFRLLLPIVTDHLRIPYRVVFLIGIVGLFVARCV 346

  Fly   740 IPFAKTLVLVGLSAAVYGLCLGSWYVLMPVLLADVFGTDRISSSYGLVRMFQSIGAISVPPLAGL 804
            :...:||.::...:.:.|:...:..:...:.::....:::::...||..|.:.:..|:|..|.|.
  Fly   347 LAENQTLPVIITMSVLTGMMKSATVINNNLTISAHCRSEKLAGGLGLSMMSKGVIVITVGQLLGW 411

  Fly   805 MRDLSGDYEICFYCMGSCMVLGTTPLIVWSILEARNHR 842
            :||.:..|.||.|..|   |:....::||:......||
  Fly   412 VRDYADSYLICLYAQG---VILLVVVLVWTPEILYRHR 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlnNP_610706.1 MFS 235..>411 CDD:119392 43/176 (24%)
MFS <656..827 CDD:119392 31/171 (18%)
MFS_1 658..>847 CDD:284993 35/186 (19%)
CG8389NP_611076.2 MFS 19..425 CDD:119392 97/588 (16%)
MFS_1 19..400 CDD:284993 88/563 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

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