DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sln and out

DIOPT Version :9

Sequence 1:NP_610706.1 Gene:Sln / 36263 FlyBaseID:FBgn0033657 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_001285435.1 Gene:out / 32926 FlyBaseID:FBgn0259834 Length:655 Species:Drosophila melanogaster


Alignment Length:689 Identity:140/689 - (20%)
Similarity:275/689 - (39%) Gaps:139/689 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 KDRDSSTTTTESGGPNVEPPDGGYGWFIVFGAFSVQFWVAGLVKSYGVLYVEIMETF---PSSTA 268
            |.||.|..     ||:...||||:||.:...|....|::...::.||::|...|::.   ...|.
  Fly    25 KRRDKSDL-----GPDFVAPDGGWGWVVCLAAGLNNFFLFPALQQYGLIYRVRMQSLGFDAKQTT 84

  Fly   269 TVASWIPAILSALCLVLAPLSSALCQRFSCRTVVFVGGIFCAMGMILSYFATSLLHLLLTFGVLT 333
            |:.:.:.||.|.:.:|    :.|:.:||:.|.|...|.....:|:.||.|.|:....::....:.
  Fly    85 TIVNVVMAISSLVGIV----NGAMFRRFTFRQVALTGTSLAFLGVFLSAFCTTFWQYIICLSAIF 145

  Fly   334 GIGGGLSTTPGIVIVSQYFDKHRALANGICVSGTAAGSFILPVLIKHLAENCGFHGTILILGGCM 398
            |||.||:.....:.|:.||...|..|.|...:.|..|....|.:...|....|..|||||..|..
  Fly   146 GIGLGLAMAATSLAVNTYFKLKRRRATGFSWTITGLGPIFFPQVSTVLLGYYGAQGTILIYAGIA 210

  Fly   399 LHVCVSATLYRPISAYTDQDSGQGQEETAKPLNEDINPSTTGILTTSTYLDTCDVGAGHELSDKF 463
            ::..:.|...:|:..:.        ::..||::..|.    ||..|..                 
  Fly   211 MNAILCALTLQPVLWHV--------KKPEKPVHNTIE----GIAETEK----------------- 246

  Fly   464 IEHLFLEESKNHLNYYASKQPAQDKSAQESDDEVKDIIGETTFIKPMKKVR----SSGLLHSVED 524
            ::...||.:.|.|:              .|:|..||.  |..:.:..|:.:    ||..|.:|:|
  Fly   247 LQPELLEANGNLLS--------------PSNDPWKDY--ECKYCQYQKRSKRGLFSSQYLFNVDD 295

  Fly   525 ----------------LSTDSTWVYRKHSGT-DSNRGSRRRRNVFANDEVISKIQAHLEK----- 567
                            ...:..|...|.|.| :|..|:|.|.......:|.|:.:.:|::     
  Fly   296 PERPGYEITEPGTPMLARANDGWFGSKLSLTSESAGGARSRTRQALMRQVSSRSRENLDRLEQNR 360

  Fly   568 ----PLSPPSV--------------VSRGLSKSMEIPTP---------VSNLSDLKQQPVEQAEL 605
                |.:|.:.              :.|..||:.....|         .:....|.|:..|..::
  Fly   361 HDQGPDTPSAAALYKPNYFNREREDLDRYASKTSVYSRPGQDELLRCTCAEDKALLQKTAESLQV 425

  Fly   606 GILDSQLVESIIDGDGHLAADEDDDDDEERGPRTCCERIEMYLDISLLQDPSFILMCLSVTLMSV 670
            .:.::             :||..:.::|.:...|..:::..:.|:.||:|.:|:.:.:.:::|..
  Fly   426 NLFNN-------------SADNTEAEEEAKRRMTFFQKVSKFFDLDLLRDFTFVNLAVGMSIMMF 477

  Fly   671 GCPYMLYYLPAHVISIGYNKSEAGYLVAISAVLDLIGRLGLGWLCDLQL----FDRKKTYTLCIL 731
            |........|..:.|.||..::...::::.|.:|:..|    :|..|.|    .|.:..:...||
  Fly   478 GEMNFSVLTPFILNSFGYTDTQISLVMSLLACMDISVR----FLAPLALEKVKLDNRVLFAFGIL 538

  Fly   732 GAGCAVLTIPFAKTL-VLVGLSAAV-YGLCLGSWYVLMPVLLADVFGTDRISSSYGLVRMFQSIG 794
            ......:.:.|..:. :::|:...: :|....:  :..|:::......:|:.::.||..:|.:|.
  Fly   539 CIAVGRVVVAFTDSYEIMIGVFLLIGFGKAFRT--IFSPLIIPSYVPLNRLPAASGLQLIFNTIF 601

  Fly   795 AISVPPLAGLMRDLSGDYEICFYCMGSCMVLGTTPLIVW 833
            :.::.|:.|::.:..| |....:.:.:..:|.   |::|
  Fly   602 SFAMGPILGILTEAYG-YAATIHTINALTLLA---LLLW 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlnNP_610706.1 MFS 235..>411 CDD:119392 46/178 (26%)
MFS <656..827 CDD:119392 30/176 (17%)
MFS_1 658..>847 CDD:284993 32/182 (18%)
outNP_001285435.1 MFS 45..>225 CDD:119392 48/183 (26%)
MFS <464..621 CDD:119392 29/163 (18%)
MFS_1 468..>621 CDD:284993 28/159 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446235
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
65.850

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