DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sln and CG8034

DIOPT Version :9

Sequence 1:NP_610706.1 Gene:Sln / 36263 FlyBaseID:FBgn0033657 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_573376.2 Gene:CG8034 / 32924 FlyBaseID:FBgn0031011 Length:647 Species:Drosophila melanogaster


Alignment Length:640 Identity:149/640 - (23%)
Similarity:273/640 - (42%) Gaps:62/640 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 PNVEPPDGGYGWFIVFGAFSVQFWVAGLVKSYGVLYVEIMETFPSSTATVASWIPAILSAL--CL 283
            |....||||:||...||...|......:..|:|:|:.:.::.....|...|    .|:|||  |:
  Fly     6 PRKVAPDGGWGWVACFGVSLVNLATRSIEPSFGLLFGDTLKELNVGTTGAA----VIISALDVCM 66

  Fly   284 VLAPL-SSALCQRFSCRTVVFVGGIFCAMGMILSYFATSLLHLLLTFGVLTGIGGGLSTTPGIVI 347
            ..:.| ...|.:.||.|.|...|.:.|.:|:.|:..|||:.|:|.|:.|:.|||.||||:...|.
  Fly    67 NFSGLFVGPLLKEFSYRKVAIAGSLLCGLGLALTSPATSMAHILSTYSVINGIGVGLSTSAAFVA 131

  Fly   348 VSQYFDKHRALANGICVSGTAAGSFILPVLIKHLAENCGFHGTILILGGCMLHVCVSATLYRPIS 412
            ::.||...|..|.|:.::|||.|..|:|.|::.|.|...|.|.:|:|.|..|:..|.:.|.:|:.
  Fly   132 LNHYFKHKRGQAVGLSMAGTAMGMLIMPQLVRILLEAYDFRGAVLLLAGVALNATVGSVLLQPVK 196

  Fly   413 AYTDQDSGQGQEETAKPLNEDINPSTTGILTTSTYLDTCDVGA---------GHELSDKFIEHLF 468
            .:..::....:......|     |:....||..........||         |:| .|...|...
  Fly   197 WHMKEEFDDEELMCISAL-----PTPQPQLTVGGAGGAASAGAPVFKVIKEDGNE-EDALPEMNT 255

  Fly   469 LEESKNHLNYYASKQPAQDKSAQESDDEVKDIIGETTFIKPMKKVRSSGLLHSVEDLSTDSTWVY 533
            |...|.|.:.::.::...:.:....:.....|....||.:.|.   .:|:..:......||.. |
  Fly   256 LLFHKPHPHQHSMRKNYSEMAMNTMNGSRLGIPKRPTFPRIMS---LAGVQSAAHGAGGDSGG-Y 316

  Fly   534 RKHSGTDSNRGSRRRRNVFAN----DEVISKIQAHLEKPLSPPSVVSRGLSKSMEIPTPVSNL-- 592
            ...:..::.:...|:.:|.:|    |...|.:|.||...........|.|.:   :.|...::  
  Fly   317 TSQAEVNATQLRCRKASVTSNLSYMDFTGSILQVHLNTGDDEFEQNDRELRR---VGTATGSIVL 378

  Fly   593 -----SDLKQQPVEQAELGILDSQLVESIIDGDGHLAADEDDDDDEERGPRTCCERIEMYLDISL 652
                 |.:|.:|.|               :|.....||..|::..::........|....|||.:
  Fly   379 GGHRDSFIKMKPTE---------------LDKQAEAAAALDEEAKKKAKKPGFWRRFADLLDIDM 428

  Fly   653 LQDPSFILMCLSVTLMSVGCPYMLYYLPAHVISIGYNKSEAGYLVAISAVLDLIGRLGLGWLCDL 717
            |:|..|:.:...:::..|.........|....::||.|::..:.::|:|:.|:..|:.|..:.|.
  Fly   429 LKDKMFLNLLFGLSIFYVAEMNFKMVTPFFFANLGYQKTDVAFCLSITAITDIAARIVLPPIFDR 493

  Fly   718 QLFDRKKTYTLCILGAGC--AVLTIPFAKTLVLVGLSAAVYGLCLGSWYVLMPVLLADVFGTDRI 780
            ....::..:.:.|:....  :::......|.:::.||  :.|...||......:.:::....:::
  Fly   494 TTIKKRTIFLVSIIFVALTRSIMAEQTEWTQLMIWLS--ICGFFRGSALSNFTLTVSEYCSLEKL 556

  Fly   781 SSSYGLVRMFQSIGAISVPPLAGLMRDLSGDYEICFYCMGSCMVLGTTPLIVWSI 835
            .|::|...:.:::..|:..||.||:||::..|.||.:....|:::..|   .|.|
  Fly   557 PSAFGWHLVGKALFVITFGPLIGLIRDVTDSYPICIHTQSVCIMICAT---AWGI 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlnNP_610706.1 MFS 235..>411 CDD:119392 60/178 (34%)
MFS <656..827 CDD:119392 32/172 (19%)
MFS_1 658..>847 CDD:284993 35/180 (19%)
CG8034NP_573376.2 MFS 20..>197 CDD:119392 61/180 (34%)
MFS <437..583 CDD:119392 25/147 (17%)
MFS_1 437..>581 CDD:284993 24/145 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 64 1.000 Domainoid score I559
eggNOG 1 0.900 - - E1_KOG2504
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm13433
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.920

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