DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sln and CG14195

DIOPT Version :9

Sequence 1:NP_610706.1 Gene:Sln / 36263 FlyBaseID:FBgn0033657 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_001285430.1 Gene:CG14195 / 32911 FlyBaseID:FBgn0030998 Length:614 Species:Drosophila melanogaster


Alignment Length:668 Identity:125/668 - (18%)
Similarity:228/668 - (34%) Gaps:228/668 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 GSGLNTARSRCVRRAKERERDRVTVARRSKQVVKDRDSSTTTTESGGPNVEPPDGGYGWFIVFGA 238
            |:|:..|.|..|||...    |.|...:.::|||......                   :::.| 
  Fly     8 GAGVGVAASGPVRRPTA----RATAGIQRRRVVKKHIQQK-------------------YMLCG- 48

  Fly   239 FSVQFWVAGLVKSYGVLYVEIMETFPSSTATVASWIPAIL----SALC-LVLAPLSS-------- 290
            |::..::|  ..:|  ||..::|:  .....:..| |||:    ..|| .::..|.:        
  Fly    49 FAIHAFLA--TPAY--LYGNVVES--DKDLVLRIW-PAIVYQATGELCRSIMEHLDTEYSGRSRE 106

  Fly   291 --------ALCQRFSCRTVVFVGGIFCAMGMILSYFATSLLHLLLTFGVLTGIGGGLSTTPGIVI 347
                    .|....:|.:::..|.:|.:..::::  .|:.:..::.:|...|||..|......||
  Fly   107 TTQYRRVFLLATLIACVSLMVSGILFSSAWIVVT--TTTQVVAIVFYGFFAGIGSSLYLWKTHVI 169

  Fly   348 ---VSQYFDKHRALANGICVSGTAAGSFILPVLIKHLAENCGFHGTILILGGCMLH---VCVSAT 406
               |....||:......:|  |.|.....|..:...|....|...:|:::...:::   :.:..|
  Fly   170 LEAVRPREDKYVRKTIHLC--GEAFCQLFLSFVFTSLRTLYGTAQSIVLMSALLVNLIPLSLIIT 232

  Fly   407 LYRPISAYTDQDSGQGQEET---AKPLNEDI------------------NPSTT------GILTT 444
            .:|. .|:|.:.....:.||   |.||...:                  ||:||      |.:..
  Fly   233 KHRE-DAFTTKRISVIKAETGFAALPLRAALAANLVADQLDGLDTLSWRNPATTEMATPSGAVAA 296

  Fly   445 STYLDTCDVGAGHELSDKFIEHLFLEESKNHLNYYASKQPAQDKSAQESDDEVKDIIGETTFIKP 509
            :..:||                        |.||..:...|.......:..|:.:||.|..  :.
  Fly   297 AVVVDT------------------------HSNYMLATDEAYVTYVNPNGVEIMEIIPEED--ET 335

  Fly   510 MKKVRSSGLLHSVEDLSTDSTWVYRKH----------------SGTDSNRGSRRRRNVFANDEVI 558
            :..:|||..  ::::.:..::.:..|.                :||.:..||             
  Fly   336 VSMMRSSNA--TIDNYAMSASQMSHKSLSNGRLYPLTPQHPLGTGTGTGTGS------------- 385

  Fly   559 SKIQAHLEKPLSPPSVVSRGLSK-SMEIPTPV-SNLSDLKQQPVEQAELGILDSQLVESIIDGDG 621
                   ..||.|.....|.:.: |..:.|.: .||.|....|::||   :|..||..:.:    
  Fly   386 -------SSPLPPDYANLRRIRRMSRAVTTHLWWNLLDKIAMPLQQA---LLVPQLYATTL---- 436

  Fly   622 HLAADEDDDDDEERGPRTCCERIEMYLDISLLQDPSFILMCLSVTLMSVGCPYMLYYLPAHVIS- 685
            .|:||                 |..|            :|||:|             ||...:| 
  Fly   437 LLSAD-----------------IFSY------------VMCLTV-------------LPGLAVSH 459

  Fly   686 IGYNKSEAGYLVAISAVLDLIGRLGLGWLC--------DLQLFDRKKTYTLCILGAGC---AVLT 739
            .....:|..:|.::         |...|:|        ...|:.||..:.  .||:.|   |::.
  Fly   460 HALKNAEIPFLFSL---------LAFPWMCFSLMTPRFGTSLYKRKLQWH--TLGSICKCLALIF 513

  Fly   740 IPFAKTLVLVGLSAAVYG 757
            |.|:.:.:|:.:||.:.|
  Fly   514 ISFSTSKLLLSVSAVLLG 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlnNP_610706.1 MFS 235..>411 CDD:119392 38/202 (19%)
MFS <656..827 CDD:119392 25/114 (22%)
MFS_1 658..>847 CDD:284993 25/112 (22%)
CG14195NP_001285430.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11360
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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