DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sln and slc16a3b

DIOPT Version :9

Sequence 1:NP_610706.1 Gene:Sln / 36263 FlyBaseID:FBgn0033657 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_997873.1 Gene:slc16a3b / 327276 ZFINID:ZDB-GENE-030131-5487 Length:508 Species:Danio rerio


Alignment Length:648 Identity:130/648 - (20%)
Similarity:226/648 - (34%) Gaps:246/648 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   217 ESGGPNVEPPDGGYGWFIVFGAFSVQFWVAGLVKSYGVLYVEIMETFP---SSTATVASWIPAIL 278
            ::|...|:.||||:||.::||.|.:..:.....|:..|.:.|::..|.   |.||    ||.:||
Zfish     7 DTGDSGVKAPDGGWGWAVLFGCFIITGFSYAFPKAVSVFFKELIREFGVGYSDTA----WISSIL 67

  Fly   279 SALCLVLAPLSSALCQRFSCRTVVFVGGIFCAMGMILSYFATSLLHLLLTFGVLTGIGGGLSTTP 343
            .|:.....||.|.|..||.||.|:.|||:|.::||:|:.|||:::|:.|..||:||:|..|:..|
Zfish    68 LAMLYGTGPLCSILVNRFGCRPVMMVGGLFASLGMVLASFATNIIHIYLCTGVITGLGLALNFQP 132

  Fly   344 GIVIVSQYFDKHRALANGICVSGTAAGSFILPVLIKHLAENCGFHGTILILGGCMLHVCVSATLY 408
            .::::::||.:.|.||||:..:|:......|..|.:.|....|:.|..|||||.:|:.|....|.
Zfish   133 SLIMLNRYFSEKRPLANGLAAAGSPVALCCLSPLGQVLQYKYGWRGGFLILGGLLLNCCACGALM 197

  Fly   409 RPISAYTDQDSGQGQEETAKPLNEDINPSTTGILTTSTYLDTCDVGAGHELSDKFIEHLFLEESK 473
            ||:.|                                                            
Zfish   198 RPLLA------------------------------------------------------------ 202

  Fly   474 NHLNYYASKQPAQDKSAQESDDEVKDIIGETTFIKPMKKVRSSGLLHSVEDLSTDSTWVYRKHSG 538
                      |.:....:|...|.|                                        
Zfish   203 ----------PKKTSEVEEKPKETK---------------------------------------- 217

  Fly   539 TDSNRGSRRRRNVFANDEVISKIQAHLEKPLSPPSVVSRGLSKSMEIPTPVSNLSDLKQQPVEQA 603
                                                           |.|               
Zfish   218 -----------------------------------------------PKP--------------- 220

  Fly   604 ELGILDSQLVESIIDGDGHLAADEDDDDDEERGPRTCCERIEMYLDISLLQDPSFILMCLSVTLM 668
                                                      ..||.::.:|..|::..::.::|
Zfish   221 ------------------------------------------KLLDFTVFKDRGFLIYTIAASIM 243

  Fly   669 SVGCPYMLYYLPAHVIS----IGYNKSEAGYLVAISAVLDLIGR------LGLGWLCDLQLFDRK 723
            .:|    |:..|..|:|    :|...:::..|:.|...:|:..|      .||.|:....::   
Zfish   244 VLG----LFVPPVFVVSYAKELGNEDTKSALLLTILGFIDIFARPTSGIIAGLKWVRPRCVY--- 301

  Fly   724 KTYTLCILGAGCAVLTIPFAKTLVLVGLSAAVYGLCLGSWYVLMPVLLADVFGTDRISSSYGLVR 788
             .::..::..|.|.:...|||....:.:....:|:..|....|...:|..:.||::.||:.|||.
Zfish   302 -LFSFAMIFNGIADILGSFAKDYASLVVFCIFFGISYGMVGALQFEVLMAIVGTEKFSSAIGLVL 365

  Fly   789 MFQSIGAISVPPLAGLMRDLSGDYEICFYCMGSCMVLGTTPLIVWSILEARNHRLFVQREEEE 851
            :.::|..:..||.||.:.|.:.:|...|...|..:||....|.:.::       ||::|:.::
Zfish   366 LVEAIAVLVGPPGAGRLLDATKNYMYVFMLAGCEVVLSALVLAICNL-------LFIKRKPQQ 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlnNP_610706.1 MFS 235..>411 CDD:119392 65/178 (37%)
MFS <656..827 CDD:119392 42/180 (23%)
MFS_1 658..>847 CDD:284993 45/198 (23%)
slc16a3bNP_997873.1 MFS 22..410 CDD:119392 120/613 (20%)
MFS_1 25..376 CDD:284993 108/576 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578937
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.850

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