DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sln and Mct1

DIOPT Version :9

Sequence 1:NP_610706.1 Gene:Sln / 36263 FlyBaseID:FBgn0033657 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_001284810.1 Gene:Mct1 / 31198 FlyBaseID:FBgn0023549 Length:626 Species:Drosophila melanogaster


Alignment Length:681 Identity:175/681 - (25%)
Similarity:291/681 - (42%) Gaps:145/681 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 PPDGGYGWFIVFGAFSVQFWVAGLVKSYGVLYVEIMETFPSSTATVASWIPAILSALCLVLAPLS 289
            |||||:||.:|||:|.:.....|:..|:|:.|.|.::.|.......| ||.:|:..:.....|:|
  Fly    28 PPDGGWGWVVVFGSFMIHIVTDGMTYSFGIFYNEFLDYFNEGKGYTA-WIASIMVGVTFSSGPIS 91

  Fly   290 SALCQRFSCRTVVFVGGIFCAMGMILSYFATSLLHLLLTFGVLTGIGGGLSTTPGIVIVSQYFDK 354
            |:...|:.||.|...|.|..|..:|:|.||.::|.|::|.|..||:|.||...|.||.|:|||:.
  Fly    92 SSFVNRYGCRAVTIAGSILAASCIIVSMFAQNVLTLIITIGFGTGLGFGLIYLPAIVSVTQYFEA 156

  Fly   355 HRALANGICVSGTAAGSFILPVLIKHLAENCGFHGTILILGGCMLHVCVSATLYRPI-------- 411
            .|:||.||.|.|:..|:|:...|.:.|..|.|:.|.:||:||.:|:..:...::||:        
  Fly   157 KRSLATGIAVCGSGFGTFVFAPLTEFLIGNYGWRGAMLIIGGIVLNCIIFGAMFRPLELEAPPQT 221

  Fly   412 -------------SAYTDQDSGQGQEETAKPLNEDINPSTTGILTTSTYL------DTCDVGAGH 457
                         ||..||::...:.|..|.|.:|            .||      ||. |..|.
  Fly   222 PPNTPSTPKLAKKSAIIDQNTTAAELEPLKVLPKD------------QYLQLPQRTDTA-VSGGA 273

  Fly   458 ELSDKFIEHLFLEESKNHLNYYASKQPAQDKSAQESDDEVKDIIGETTFIKPMKKVRSSGLLHSV 522
            ......:.|.......|:.|...:.|                  |.|....|...|:|:      
  Fly   274 LCRSNSVGHNLKPNLNNNSNGAVNGQ------------------GPTLVTPPQAVVKST------ 314

  Fly   523 EDLSTDSTWVYRKHSGTDSNRGSRRRRNVFANDEVISKIQAHLEKPLSPPSVVSRGLSKS----- 582
                                          :||::..|..:.|:  |:|.....|..|.|     
  Fly   315 ------------------------------SNDDIARKCHSQLQ--LTPLRDAHRERSASGTMYR 347

  Fly   583 ---------MEIPTPVSNLSDLKQQPVEQAELGILDSQLVESIIDGDGHLAADEDDDDDEERGPR 638
                     ..:|..||:.:||.:            |.....:|...|.|....:....:|..  
  Fly   348 PDALYQGSLHNLPDYVSSRNDLSR------------SMSGSGVIKRYGSLRQSNNVSQSQEEA-- 398

  Fly   639 TCCERI-----------EMYLDISLLQDPSFILMCLSVTLMSVG--CPYMLYYLPAHVISIGYNK 690
            .||..|           || ::.|||:|..|::..:|....|:|  .||:  |:.|:..::...|
  Fly   399 KCCGCITCSKETRDTFAEM-MNFSLLKDMVFVIFSVSNFCTSIGFNVPYL--YVVAYAETLKLTK 460

  Fly   691 SEAGYLVAISAVLDLIGRLGLGWLCDLQLFDRKKTYTLCILGAGCAVLTIPFAKTLVLVGLSAAV 755
            ::|.||::...|.:.:||:.||::.|....:|...|.:|:...|.:...:|.......:.....|
  Fly   461 TDASYLISTIGVANTVGRIILGYISDKPWVNRLLVYNVCLTACGVSTAMVPLCHDFQSLAFYCCV 525

  Fly   756 YGLCLGSWYVLMPVLLADVFGTDRISSSYGLVRMFQSIGAISVPPLAGLMRDLSGDYEICFYCMG 820
            :|..:|::..|..|:|.|:.|.|::::::||:.:||.|.:...||:.|.|.||:..|...|...|
  Fly   526 FGFTIGAYVGLTSVILVDLLGLDKLTNAFGLLLLFQGIASFIGPPIGGWMYDLTDSYAPAFLMAG 590

  Fly   821 SCMVLGTTPLIVWSILEARNHRLFVQREEEE 851
              :::..:.|::::|...:  ||.|::.|.:
  Fly   591 --LMIAISGLVMFAIPPLQ--RLQVRKSERK 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlnNP_610706.1 MFS 235..>411 CDD:119392 64/175 (37%)
MFS <656..827 CDD:119392 46/172 (27%)
MFS_1 658..>847 CDD:284993 51/190 (27%)
Mct1NP_001284810.1 MFS 35..>213 CDD:119392 65/178 (37%)
MFS <426..604 CDD:119392 47/181 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446243
Domainoid 1 1.000 45 1.000 Domainoid score I4618
eggNOG 1 0.900 - - E1_KOG2504
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 117 1.000 Inparanoid score I274
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - mtm13433
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
109.900

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