DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sln and Slc16a4

DIOPT Version :9

Sequence 1:NP_610706.1 Gene:Sln / 36263 FlyBaseID:FBgn0033657 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_001013935.1 Gene:Slc16a4 / 295356 RGDID:1359655 Length:500 Species:Rattus norvegicus


Alignment Length:628 Identity:145/628 - (23%)
Similarity:245/628 - (39%) Gaps:155/628 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   217 ESGGPNVEPPDGGYGWFIVFGAFSVQFWVAGLVKSYGVLYVEIMETFPSSTATVASWIPAILSAL 281
            |...|..:|.|||:||.:|...|.|..:|.|:.|::.:.:|...|.| ..|:....||.:|:|:|
  Rat     6 EKPSPYTKPLDGGWGWMVVLHFFLVNVFVMGMTKTFAIFFVVFQEEF-EGTSEQIGWIGSIMSSL 69

  Fly   282 CLVLAPLSSALCQRFSCRTVVFVGGIFCAMGMILSYFATSLLHLLLTFGVLTGIGGGLSTTPGIV 346
            .....||::.:|..|..:|...:|....:.|.::|.:||.:..|.:|.|:|.|:|.........|
  Rat    70 RFSAGPLAAIICDIFGEKTTSILGTFLVSGGYLISSWATGIPFLCVTMGLLPGLGSAFLYQVAAV 134

  Fly   347 IVSQYFDKHRALANGICVSGTAAGSFILPVLIKHLAENCGFHGTILILGGCMLHVCVSATLYRPI 411
            ::::||.|...|:..|..||... :|:|....|.|.:...:.|.:::.|...|::..|:.|.||:
  Rat   135 VITKYFKKRLGLSTAIARSGMGL-TFLLAPFTKLLIDLYDWTGALILFGAIALNLVPSSMLLRPV 198

  Fly   412 SAYTDQDSGQGQEETAKPLNEDINPSTTGILTTSTYLDTCDVGAGHELSDKFIEHLFLEESKNHL 476
            ...:|.             |.||  ...|.:.::|         |.|||.|              
  Rat   199 HIQSDS-------------NSDI--KNKGSILSAT---------GPELSHK-------------- 225

  Fly   477 NYYASKQPAQDKSAQES---DDEVKDIIGETTFIKPMKKVRSSGLLHSVEDLSTDSTWVYRKHSG 538
                ::.|.::| ||||   |..||.....||.:..::        :.:|::||      |.|  
  Rat   226 ----TETPNRNK-AQESLIKDSAVKKSGQPTTTLTVLE--------NQIEEIST------RPH-- 269

  Fly   539 TDSNRGSRRRRNVFANDEVISKIQAHLEKPLSPPSVVSRGLSKSMEIPTPVSNLSDLKQQPVEQA 603
                   |.|..:.:||:...|            ..||                           
  Rat   270 -------RNRPLLMSNDKTYKK------------KFVS--------------------------- 288

  Fly   604 ELGILDSQLVESIIDGDGHLAADEDDDDDEERGPRTCCERIEMYLDISLLQDPSFILMCLSVTLM 668
                                              ..|.|::   |||||.::|.|.:...|..|.
  Rat   289 ----------------------------------WNCKEKL---LDISLFRNPFFYIFTWSFLLS 316

  Fly   669 SVGCPYMLYYLPAHVISIGYNKSEAGYLVAISAVLDLIGRLGLGWLCD---LQLFDRKKTY-TLC 729
            .:......::|.|...::|.:..:|.|||:::.:.:.:.:|..||:.|   ::.:...|.| .||
  Rat   317 QLAYFIPTFHLVARAKTLGIDIMDASYLVSVAGITETVSQLISGWIADQNWIKKYQYHKAYLILC 381

  Fly   730 ILGAGCAVLTIPFAKTLVLVGLSAAVYGLCLGSWYVLMPVLLADVFGTDRISSSYGLVRMFQSIG 794
                |...|..|.|.|..|:......:.:..|.:..|:..:|.|:....|:....|....|..:.
  Rat   382 ----GVTNLLAPLATTFPLLMAYTIFFAIFAGGYLALILPVLVDLSKNSRVHRFLGYASFFAGMA 442

  Fly   795 AISVPPLAGLMRDLSGDYEICFYCMGSCMVLGTTPLIVWSILE 837
            .:|.||:||.:.|.:..|...||..|:|.:|.:..|....:.|
  Rat   443 VLSGPPIAGWIYDYTQTYVGSFYFSGTCYILSSVSLFFVPLAE 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlnNP_610706.1 MFS 235..>411 CDD:119392 49/175 (28%)
MFS <656..827 CDD:119392 44/174 (25%)
MFS_1 658..>847 CDD:284993 45/184 (24%)
Slc16a4NP_001013935.1 MFS_MCT5 20..486 CDD:340979 139/614 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166339279
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.750

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