DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sln and Slc16a13

DIOPT Version :9

Sequence 1:NP_610706.1 Gene:Sln / 36263 FlyBaseID:FBgn0033657 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_001005530.1 Gene:Slc16a13 / 287451 RGDID:1359138 Length:428 Species:Rattus norvegicus


Alignment Length:647 Identity:143/647 - (22%)
Similarity:232/647 - (35%) Gaps:250/647 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   224 EPPDGGYGWFIVFGAFSVQFWVAGLVKSYGVLYVEIMETFPSSTATVASWIPAILSALCLVLAPL 288
            ||||||:||.:|..||.....|.|:::|:||.:||.:..|....|.| |||.:|..|:....:|:
  Rat     6 EPPDGGWGWMVVLSAFFQSALVFGVLRSFGVFFVEFVAAFEEQAARV-SWIASIGIAVQQFGSPI 69

  Fly   289 SSALCQRFSCRTVVFVGGIFCAMGMILSYFATSLLHLLLTFGVLTGIGGGLSTTPGIVIVSQYFD 353
            .|||..:...|.||..|||..|:||:|:.|||||.||.|:.|:|:|.|..|:.||.:..:|:||.
  Rat    70 GSALSTKLGPRPVVMTGGILAALGMLLASFATSLTHLYLSIGLLSGSGWALTFTPTLACLSRYFS 134

  Fly   354 KHRALANGICVSGTAAGSFILPVLIKHLAENCGFHGTILILGGCMLHVCVSATLYRPISAYTDQD 418
            :.|:||.|:.::|....||....|.:.|..|..:.|.:|::....||:.....|.||:|      
  Rat   135 QRRSLAMGLALTGVGISSFAFAPLFQWLLNNYAWRGALLLVSALSLHLVACGALLRPLS------ 193

  Fly   419 SGQGQEETAKPLNEDINPSTTGILTTSTYLDTCDVGAGHELSDKFIEHLFLEESKNHLNYYASKQ 483
                                   ||                                        
  Rat   194 -----------------------LT---------------------------------------- 195

  Fly   484 PAQDKSAQESDDEVKDIIGETTFIKPMKKVRSSGLLHSVEDLSTDSTWVYRKHSGTDSNRGSRRR 548
                                                   ||.:....|..               
  Rat   196 ---------------------------------------EDTAVGGPWAQ--------------- 206

  Fly   549 RNVFANDEVISKIQAHLEKPLSPPSVVSRGLSKSMEIPTPVSNLSDLKQQPVEQAELGILDSQLV 613
                     |:.:..|                                                 
  Rat   207 ---------ITSLLCH------------------------------------------------- 213

  Fly   614 ESIIDGDGHLAADEDDDDDEERGPRTCCERIEMYLDISLLQDPSFILMCLSVTLMSVG--CPYML 676
                                  ||                    |:...:::||::.|  .||: 
  Rat   214 ----------------------GP--------------------FLRYTVALTLINTGYFIPYV- 235

  Fly   677 YYLPAHVISIGYNKSEAGYLVAISAVLDLIGRLGLGWLCDLQLFDRKKTYTLCILGAGCAVLTIP 741
             :|.||:..:|::...|.:|::::|:.||:||:..|||.|.......:...|.....|.::...|
  Rat   236 -HLVAHLQDLGWDPLPAAFLLSVAAISDLVGRVASGWLGDAVPGPVARLLMLWTTLTGVSLALFP 299

  Fly   742 FAKTLVLVGLSAAVYGLCLGSWYVLMPV---LLADVFGTDRISSSYGLVRMFQSIGAISVPPLAG 803
            .|:....:.:.|..||...|:   |.||   ::.::.||.||....|||:|.:|:|.:...||:|
  Rat   300 VAQASTTLVVLAVAYGFTSGA---LTPVAFSVIPELVGTGRIYCGLGLVQMIESVGGLLGAPLSG 361

  Fly   804 LMRDLSGDYEICFYCMGSCMVLGTTPLIVWS----------------ILEARNHRLFVQREE 849
            .:||::|:|...|...|:.::.|:..||...                ::||.:.::.:.:||
  Rat   362 YLRDVTGNYTASFVVAGAFLLAGSGVLITLPHFFSCISLSTSRPQDLVIEAPDTKIPLPKEE 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlnNP_610706.1 MFS 235..>411 CDD:119392 66/175 (38%)
MFS <656..827 CDD:119392 51/175 (29%)
MFS_1 658..>847 CDD:284993 56/209 (27%)
Slc16a13NP_001005530.1 MFS_MCT11_13 13..392 CDD:340981 133/607 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166339280
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.840

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