DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sln and Slc16a11

DIOPT Version :9

Sequence 1:NP_610706.1 Gene:Sln / 36263 FlyBaseID:FBgn0033657 Length:855 Species:Drosophila melanogaster
Sequence 2:XP_038941393.1 Gene:Slc16a11 / 287450 RGDID:1311125 Length:593 Species:Rattus norvegicus


Alignment Length:644 Identity:145/644 - (22%)
Similarity:214/644 - (33%) Gaps:262/644 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 SGGPNVE--------------------PPDGGYGWFIVFGAFSVQFWVAGLVKSYGVLYVEIMET 262
            |.||.||                    |||||:||.:...||:|.....||::|.|:...::.|.
  Rat   127 SRGPGVETSFTGVSPPQQTAMTPKPAGPPDGGWGWVVAAAAFAVNGLSYGLLRSLGLALPDLAEH 191

  Fly   263 FPSSTATVASWIPAILSALCLVLAPLSSALCQRFSCRTVVFVGGIFCAMGMILSYFATSLLHLLL 327
            |..|....| |:.|:..|:....:|:.|||..|:..|.||.|||:..::|::.|.||.|||||.|
  Rat   192 FERSAQDTA-WVSALALAVQQAASPVGSALSTRWGARPVVMVGGVLTSLGLVFSAFARSLLHLYL 255

  Fly   328 TFGVLTGIGGGLSTTPGIVIVSQYFDKHRALANGICVSGTAAGSFILPVLIKHLAENCGFHGTIL 392
            ..|:|.|.|..|...|.:..:|:||.:.|.||.|:.::|..|.|.:|...::.|.:..|:.|.:|
  Rat   256 GLGLLAGSGWALVFAPALGTLSRYFSRRRVLAVGLALTGNGASSLLLAPALQFLLDTFGWRGALL 320

  Fly   393 ILGGCMLHVCVSATLYRPISAYTDQDSGQGQEETAKPLNEDINPSTTGILTTSTYLDTCDVGAGH 457
            :||...||:.....|.||::                                             
  Rat   321 LLGAVTLHLTPCGALLRPLA--------------------------------------------- 340

  Fly   458 ELSDKFIEHLFLEESKNHLNYYASKQPAQDKSAQESDDEVKDIIGETTFIKPMKKVRSSGLLHSV 522
                                                                             
  Rat   341 ----------------------------------------------------------------- 340

  Fly   523 EDLSTDSTWVYRKHSGTDSNRGSRRRRNVFANDEVISKIQAHLEKPLSPPSVVSRGLSKSMEIPT 587
              ||.|                                       ||:||.             |
  Rat   341 --LSGD---------------------------------------PLAPPR-------------T 351

  Fly   588 PVSNLSDLKQQPVEQAELGILDSQLVESIIDGDGHLAADEDDDDDEERGPRTCCERIEMYLDISL 652
            |                                  |||                      |.:.|
  Rat   352 P----------------------------------LAA----------------------LGLGL 360

  Fly   653 LQDPSFILMCLSVTLMSVG--CPYMLYYLPAHVISIGYNKSEAGYLVAISAVLDLIGRLGLGWLC 715
            .:.|:|.:..|...|:..|  .||:  :|..|.:..|.....|..:||::||.|...||..|||.
  Rat   361 FRRPAFSVFALGTALIGGGYFVPYV--HLGPHALDQGMGGYGAALVVAVAAVGDASARLVSGWLA 423

  Fly   716 DLQLFDRKKTYTLCILGA--GCAVLTIPFAKTLVLVG----------LSAAVYGLCLGSWYVLMP 768
            |.......:  .|.:.|:  |..||.:....|   ||          .:|..|||..||:..|:.
  Rat   424 DQGWVPLPR--LLVVFGSLTGLGVLAVGLVPT---VGTEEGWGAPLLAAAGAYGLSAGSYAPLVF 483

  Fly   769 VLLADVFGTDRISSSYGLVRMFQSIGAISVPPLAGLMRDLSGDYEICFYCMGSCMVLGT 827
            .:|..:.|...:..:.|||.|..|:|.:..|||:|.:||.:||:...|....|.::.|:
  Rat   484 GVLPGLVGIGGVVQATGLVMMLMSLGGLLGPPLSGFLRDKTGDFSASFLVCSSFILSGS 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlnNP_610706.1 MFS 235..>411 CDD:119392 62/175 (35%)
MFS <656..827 CDD:119392 55/184 (30%)
MFS_1 658..>847 CDD:284993 55/184 (30%)
Slc16a11XP_038941393.1 PHA03378 <42..158 CDD:223065 8/30 (27%)
MFS_MCT11_13 160..549 CDD:340981 135/611 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166339252
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.840

Return to query results.
Submit another query.