DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sln and mct-3

DIOPT Version :9

Sequence 1:NP_610706.1 Gene:Sln / 36263 FlyBaseID:FBgn0033657 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_510308.1 Gene:mct-3 / 181497 WormBaseID:WBGene00010834 Length:596 Species:Caenorhabditis elegans


Alignment Length:658 Identity:167/658 - (25%)
Similarity:284/658 - (43%) Gaps:131/658 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   191 RERDRVTVARRSKQVVKDRDSSTTTTESGGPNVEPPDGGYGWFIVFGAFSVQFWVAGLVKSYG-V 254
            ::.|....|.:..:.|:..      .|..| .:.||||||||.||..:|.:...|.|::.:.| :
 Worm     6 QQADEKAAAHQDPETVEKE------LEDAG-FIAPPDGGYGWAIVAASFLLNMIVDGVIFTVGKI 63

  Fly   255 LYVEIMETFPSSTATVASWIPAILSALCLVLAPLSSALCQRFSCRTVVFVGGIFCAMGMILSYFA 319
            |....:.:|..|.|:.|..: :|||.......|::|.||..|.||.|...|.:..|:|.:||..|
 Worm    64 LQPAWVHSFGISEASAAMTM-SILSGCYFFAGPIASVLCNVFGCRQVALAGSLIAALGFLLSISA 127

  Fly   320 TSLLHLLLTFGVLTGIGGGLSTTPGIVIVSQYFDKHRALANGICVSGTAAGSFILPVLIKHLAEN 384
            .::..|.::||::.|.|.|:...|.|||:||||.|.|::|.||.|.|:..|:.:..:|...:.:.
 Worm   128 PNIYVLYVSFGLIAGAGFGMMYLPAIVIISQYFAKKRSVATGIAVCGSGIGTTVFALLNDVVWDF 192

  Fly   385 CG--------FHGTILILGGCMLHVCVSATLYRPISAYTDQDSGQGQEETAKPLNEDINPSTTGI 441
            .|        :...:.|.|   |..|:   |.||:....||     .|:.||.| ||.       
 Worm   193 VGGDWKQFLVYTAAVTISG---LGACI---LLRPLKPSKDQ-----IEKVAKVL-EDY------- 238

  Fly   442 LTTSTYLDTCDVGAGHELSDKFIEHLFLEESKNHLNYYASKQ--PAQDKSAQESDDEVKDIIGET 504
                           .|..:|..|...|  ||::..:.:|.:  .|...........:|.|:   
 Worm   239 ---------------EEHKEKVPESPLL--SKHNTPFLSSLELHTAGKLENGHHTGSIKSIV--- 283

  Fly   505 TFIKPMKKVRSSGLLHSVEDLSTDSTWVYRK---HSGTDSNRGSRRRRNVFANDEVISKIQAHLE 566
                       ..:...:|||:..   :.||   :||:.:|..:|.|......:|.....|    
 Worm   284 -----------DAVSKEIEDLNKP---LLRKDIFYSGSTTNIAARSRTGTMTREEAAEHQQ---- 330

  Fly   567 KPLSPPSVVSRGLSKSMEIPTPVSNLSDLKQQPVEQAELGILDSQLVESIIDGDGHLAADEDDDD 631
                  |:..||     ::.||        ||.:.:|:|...|          :|.:|...:...
 Worm   331 ------SLRFRG-----KVETP--------QQYLSKADLNAGD----------NGDVAIANESKI 366

  Fly   632 DEERGPRTCCERIEMYLDISLLQDPSFILMCLSVTLMSVGCPYMLY-YLPAHVISI-GYNKSEAG 694
            .|.:      :.::..:|..||..|||:|:..|.|| ::.|.|:.: ||..|:..| |...:|..
 Worm   367 QEIK------QALKQLVDKELLFSPSFLLLAFSGTL-TLCCFYVPFIYLGNHLDKIEGLTTAEKS 424

  Fly   695 YLVAISAVLDLIGRLGLGWLCDLQLFDRKKTYTLCILGAGCAVLTIP-------FAKTLVLVGLS 752
            :.|::..||:::.|:|.|.|.|.............::.||.|.:|:|       |....|...:.
 Worm   425 FTVSLIGVLNIVARIGCGILADRPEVSALAVNNFALIAAGLATMTVPLYTAYWQFLAFCVPFSIG 489

  Fly   753 AAVYGLCLGSWYVLMPVLLADVFGTDRISSSYGLVRMFQSIGAISVPPLAGLMRDLSGDYEICFY 817
            .|.:.       .|..:::.::.|.:::|:::|::..|..:||:...|||..|:|.:|:::..||
 Worm   490 VACFA-------ALRSIIVVELIGLEKLSNAFGILLTFMGVGAVVGSPLAAAMKDYTGNFDTSFY 547

  Fly   818 CMGSCMVL 825
            .||:.|.:
 Worm   548 VMGALMTI 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlnNP_610706.1 MFS 235..>411 CDD:119392 57/184 (31%)
MFS <656..827 CDD:119392 49/179 (27%)
MFS_1 658..>847 CDD:284993 47/177 (27%)
mct-3NP_510308.1 MFS_MCT_SLC16 39..563 CDD:340910 156/618 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.820

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